RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 SPINK9Q5DT21 86 aa12.82□□□□□ -0.36
HMGCL-209ENST00000513148 OR1L8Q8NGR8 309 aa12.82□□□□□ -0.36
HMGCL-209ENST00000513148 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
HMGCL-209ENST00000513148 CIDEAO60543 219 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 RAB9AP51151 201 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 COX19Q49B96 90 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 Q6ZRM9 215 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 Q8N976 141 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 KLHL30-AS1Q8NEE0 82 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 FAM110DQ8TAY7 271 aaPredicted RBP12.81□□□□□ -0.36
HMGCL-209ENST00000513148 CACNG5Q9UF02 275 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 M0QZ24 198 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 HYPMO75409 117 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 TRGV3P03979 118 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 GPX1P07203 203 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
HMGCL-209ENST00000513148 ARL16Q0P5N6 197 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 RNF152Q8N8N0 203 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
HMGCL-209ENST00000513148 MRPL27Q9P0M9 148 aaKnown RBP12.81□□□□□ -0.36
HMGCL-209ENST00000513148 SERF1AO75920 110 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 NXPH3O95157 252 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 RHOGP84095 191 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 SPATA45Q537H7 98 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 ETFRF1Q6IPR1 90 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 HAPLN4Q86UW8 402 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 SFRP2Q96HF1 295 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
HMGCL-209ENST00000513148 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 IGLC7A0M8Q6 106 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 DIRC3C9JPN6 131 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 RPL19P84098 196 aaKnown RBP12.79□□□□□ -0.36
HMGCL-209ENST00000513148 OR10J3Q5JRS4 329 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 TMEM14EPQ6UXP3 125 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 C8orf86Q6ZUL3 223 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 TTC9CQ8N5M4 171 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
HMGCL-209ENST00000513148 ZNF253O75346 499 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 TXN2Q99757 166 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 GNB4Q9HAV0 340 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 ZNF257Q9Y2Q1 563 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 VWFP04275 2813 aa12.79□□□□□ -0.36
HMGCL-209ENST00000513148 NPIPB5A8MRT5 1133 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 C11orf94C9JXX5 98 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 DEFA4P12838 97 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 HSPE1P61604 102 aaKnown RBP12.78□□□□□ -0.36
HMGCL-209ENST00000513148 DEFB136Q30KP8 78 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 Q6ZN92 141 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 ZNF491Q8N8L2 437 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 ZNF709Q8N972 641 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 OR10G9Q8NGN4 311 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 OR10G7Q8NGN6 311 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 MYOZ3Q8TDC0 251 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 LY96Q9Y6Y9 160 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 HSBP1L1C9JCN9 74 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 MT-ND6P03923 174 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 NPPCP23582 126 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 PMCHL1Q16048 86 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 OR1L6Q8NGR2 347 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 DUX3Q96PT4 197 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 GNB1LQ9BYB4 327 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 PLEKHA3Q9HB20 300 aa12.78□□□□□ -0.36
HMGCL-209ENST00000513148 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-209ENST00000513148 H3BP45 60 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 H3BUA1 57 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 PAGE4O60829 102 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 BAGE3Q86Y29 109 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 BAGE2Q86Y30 109 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 OR4C5Q8NGB2 326 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 UBE2E2Q96LR5 201 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 TMEM147Q9BVK8 224 aa12.77□□□□□ -0.37
HMGCL-209ENST00000513148 OR2J3O76001 311 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 ACSM6Q6P461 480 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 OR4F17Q8NGA8 305 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 SRSF8Q9BRL6 282 aaKnown RBP12.76□□□□□ -0.37
HMGCL-209ENST00000513148 MRPL18Q9H0U6 180 aaKnown RBP12.76□□□□□ -0.37
HMGCL-209ENST00000513148 IL36BQ9NZH7 164 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 FBXL7Q9UJT9 491 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 CRYGCP07315 174 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 TSPOP30536 169 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 OR10G8Q8NGN5 311 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 C4orf3Q8WVX3 66 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 CSTL1Q9H114 145 aa12.76□□□□□ -0.37
HMGCL-209ENST00000513148 GRIFINA4D1Z8 144 aa12.75□□□□□ -0.37
HMGCL-209ENST00000513148 C17orf112F2Z3M2 114 aa12.75□□□□□ -0.37
HMGCL-209ENST00000513148 CD33P20138 364 aa12.75□□□□□ -0.37
HMGCL-209ENST00000513148 VWC2Q2TAL6 325 aa12.75□□□□□ -0.37
HMGCL-209ENST00000513148 PF4P02776 101 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 FFAR4Q5NUL3 377 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 WDR73Q6P4I2 378 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 FANCD2OSQ96PS1 177 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 ENY2Q9NPA8 101 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 S4R3C0 116 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 PET117Q6UWS5 81 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms