RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 LY75O60449 1722 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 COL14A1Q05707 1796 aaKnown RBP0.79□□□□□ -2.28
GYPA-209ENST00000512789 IGKV1D-42A0A075B6H8 117 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 LOC110117498A0A087WWA1 95 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 PQLC2LA1A4F0 135 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 TGOLN2O43493 480 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 CRYZL1O95825 349 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 IGKV1-5P01602 117 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 CTSDP07339 412 aaPredicted RBP0.79□□□□□ -2.28
GYPA-209ENST00000512789 MIFP14174 115 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 S100A4P26447 101 aaKnown RBP0.79□□□□□ -2.28
GYPA-209ENST00000512789 SNRPD2P62316 118 aaKnown RBP0.79□□□□□ -2.28
GYPA-209ENST00000512789 KISS1Q15726 138 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 Q6ZQT0 140 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 ANKRD29Q8N6D5 301 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 Q8N814 137 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 DCUN1D1Q96GG9 259 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 NIPSNAP1Q9BPW8 284 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 ACER3Q9NUN7 267 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 ERGIC3Q9Y282 383 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 TMEM56-RWDD3S4R434 201 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 CSPG4Q6UVK1 2322 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 HMCN2Q8NDA2 5059 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 DNAH3Q8TD57 4116 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 TMEM2Q9UHN6 1383 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 ERBINQ96RT1 1412 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 GPR98Q8WXG9 6306 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 MED12LQ86YW9 2145 aa0.79□□□□□ -2.28
GYPA-209ENST00000512789 INO80Q9ULG1 1556 aaPredicted RBP0.79□□□□□ -2.28
GYPA-209ENST00000512789 C5P01031 1676 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 LMO7Q8WWI1 1683 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 LRRC37A2A6NM11 1700 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 RGPD8O14715 1765 aaPredicted RBP0.78□□□□□ -2.28
GYPA-209ENST00000512789 LTN1O94822 1766 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 MAP2P11137 1827 aaKnown RBP0.78□□□□□ -2.28
GYPA-209ENST00000512789 TAF1LQ8IZX4 1826 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 WNK3Q9BYP7 1800 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 FER1L6Q2WGJ9 1857 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 UBR3Q6ZT12 1888 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 PKD1P98161 4303 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 HEATR5AQ86XA9 2040 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 EXOC1LA0A1B0GW35 172 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 SULT1B1O43704 296 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 UBL3O95164 117 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 HIST1H1EP10412 219 aaKnown RBP0.78□□□□□ -2.28
GYPA-209ENST00000512789 ZNF93P35789 620 aaPredicted RBP0.78□□□□□ -2.28
GYPA-209ENST00000512789 PDE6HQ13956 83 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 SIGLECL1Q8N7X8 197 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 TERB2Q8NHR7 220 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 SLC35A3Q9Y2D2 325 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 BCL9O00512 1426 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 SPTBN1Q01082 2364 aaKnown RBP0.78□□□□□ -2.28
GYPA-209ENST00000512789 CASKIN1Q8WXD9 1431 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 WNK1Q9H4A3 2382 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 FAT2Q9NYQ8 4349 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 DNAH10Q8IVF4 4471 aa0.78□□□□□ -2.28
GYPA-209ENST00000512789 ALS2Q96Q42 1657 aa0.78□□□□□ -2.29
GYPA-209ENST00000512789 CEP152O94986 1710 aa0.78□□□□□ -2.29
GYPA-209ENST00000512789 IFT172Q9UG01 1749 aa0.78□□□□□ -2.29
GYPA-209ENST00000512789 RALGAPA2Q2PPJ7 1873 aa0.78□□□□□ -2.29
GYPA-209ENST00000512789 ANAPC1Q9H1A4 1944 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 APC2O95996 2303 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 DNAH9Q9NYC9 4486 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 COL7A1Q02388 2944 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 C2orf70A6NJV1 201 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 PIRO00625 290 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 IFNA5P01569 189 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 PRB4P10163 310 aaPredicted RBP0.77□□□□□ -2.29
GYPA-209ENST00000512789 CRYGAP11844 174 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 HIST1H1TP22492 207 aaPredicted RBP0.77□□□□□ -2.29
GYPA-209ENST00000512789 OR2F1Q13607 317 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 GDF5OSQ5U4N7 250 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 KRT222Q8N1A0 295 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 ZNF418Q8TF45 676 aaPredicted RBP0.77□□□□□ -2.29
GYPA-209ENST00000512789 SFT2D1Q8WV19 159 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 H1FXQ92522 213 aaKnown RBP0.77□□□□□ -2.29
GYPA-209ENST00000512789 CCDC90BQ9GZT6 254 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 CMTM6Q9NX76 183 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 NUP155O75694 1391 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 HSPG2P98160 4391 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 PLEKHH2Q8IVE3 1493 aa0.77□□□□□ -2.29
GYPA-209ENST00000512789 DYNC1H1Q14204 4646 aaKnown RBP0.77□□□□□ -2.29
GYPA-209ENST00000512789 SSPOA2VEC9 5147 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 MYCBP2O75592 4640 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 NBASA2RRP1 2371 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 AHCTF1Q8WYP5 2266 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 FANCMQ8IYD8 2048 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 MAST2Q6P0Q8 1798 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 TJP1Q07157 1748 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 CLTCL1P53675 1640 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 TRPM1Q7Z4N2 1603 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 HUWE1Q7Z6Z7 4374 aaKnown RBP0.76□□□□□ -2.29
GYPA-209ENST00000512789 TRAV1-1A0A0B4J248 108 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 OR2T1O43869 369 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 RBP1P09455 135 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 NKX2-5P52952 324 aaPredicted RBP0.76□□□□□ -2.29
GYPA-209ENST00000512789 YPEL3P61236 119 aaPredicted RBP0.76□□□□□ -2.29
GYPA-209ENST00000512789 CDKL4Q5MAI5 379 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
GYPA-209ENST00000512789 C8orf74Q6P047 294 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms