RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 FNDC10F2Z333 226 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 AGPAT2O15120 278 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 GNG7O60262 68 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 IFNA7P01567 189 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 IGHV3-11P01762 117 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 MDKP21741 143 aaPredicted RBP5.33□□□□□ -1.56
RFC1-213ENST00000512275 GATA2P23769 480 aaPredicted RBP5.33□□□□□ -1.56
RFC1-213ENST00000512275 SLC35B1P78383 322 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 ATP5G2Q06055 141 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 TIGITQ495A1 244 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 MIC13Q5XKP0 118 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 TMEM144Q7Z5S9 345 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 ZNF709Q8N972 641 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 NECAP1Q8NC96 275 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 CACNG8Q8WXS5 425 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 GNPNAT1Q96EK6 184 aaPredicted RBP5.33□□□□□ -1.56
RFC1-213ENST00000512275 PARD6GQ9BYG4 376 aaPredicted RBP5.33□□□□□ -1.56
RFC1-213ENST00000512275 NPVFQ9HCQ7 196 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 C21orf62Q9NYP8 219 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 THYN1Q9P016 225 aa5.33□□□□□ -1.56
RFC1-213ENST00000512275 TCRBV4S1A1TA0A5B7 111 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 OR2T8A6NH00 312 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 FAM223BA6NKX1 122 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 C17orf112F2Z3M2 114 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 H3BUA1 57 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 MPDU1O75352 247 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 EIF3GO75821 320 aaKnown RBP eCLIP5.32□□□□□ -1.56
RFC1-213ENST00000512275 IGHG4P01861 327 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 IGLC1P0CG04 106 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 RAB2AP61019 212 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 ZNF90Q03938 601 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 RAB31Q13636 194 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 GCSAMLQ5JQS6 135 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 EIF5AL1Q6IS14 154 aaKnown RBP5.32□□□□□ -1.56
RFC1-213ENST00000512275 CLEC19AQ6UXS0 136 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 CYP2G1PQ6ZSU1 146 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 ZNF767PQ75MW2 155 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 FAM223AQ8IWN6 122 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 ARL6IP6Q8N6S5 226 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 BPIFCQ8NFQ6 507 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 OR4X1Q8NH49 305 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 ZNF502Q8TBZ5 544 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 VN1R17PQ8TDU5 208 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 EEF1AKMT3Q96AZ1 226 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 PHYHIPLQ96FC7 376 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 OR5B12Q96R08 314 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 PSMG3Q9BT73 122 aaPredicted RBP5.32□□□□□ -1.56
RFC1-213ENST00000512275 VSIRQ9H7M9 311 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 GNB4Q9HAV0 340 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 DOK5Q9P104 306 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 TIMM9Q9Y5J7 89 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 PXMP4Q9Y6I8 212 aa5.32□□□□□ -1.56
RFC1-213ENST00000512275 IGHV3-35A0A0C4DH35 117 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 PPP5D1E7EU14 171 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 K7EQD1 137 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 YIF1AO95070 293 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 NXPH4O95158 308 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 TRBV12-3P01733 135 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 SEC11BP0C7V7 166 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 LINC00869P0C866 280 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 PSMB8P28062 276 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 RAB9AP51151 201 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 B2MP61769 119 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 KLK9Q2XQG4 91 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 KRTAP24-1Q3LI83 254 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 AKR1C8PQ5T2L2 129 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 Q6ZRG5 221 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 LINC01006Q8NI28 216 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 FAM213BQ8TBF2 198 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 C11orf52Q96A22 123 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 TRGV9Q99603 122 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 LITAFQ99732 161 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 CHRDL1Q9BU40 450 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 KCNIP2Q9NS61 270 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 SLC39A9Q9NUM3 307 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 KLK9Q9UKQ9 250 aa5.31□□□□□ -1.56
RFC1-213ENST00000512275 SETD2Q9BYW2 2564 aaPredicted RBP5.31□□□□□ -1.56
RFC1-213ENST00000512275 CUBNO60494 3623 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 C2CD3Q4AC94 2353 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 IGHV3OR16-8A0A075B7F1 116 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 A0A1B0GV50 99 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 ZNF705EA8MWA4 302 aaPredicted RBP5.3□□□□□ -1.56
RFC1-213ENST00000512275 TEX46H3BTG2 121 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 TGOLN2O43493 480 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 NDUFA7O95182 113 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 BRI3O95415 125 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 IGKV1-17P01599 117 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 RPL29P47914 159 aaKnown RBP5.3□□□□□ -1.56
RFC1-213ENST00000512275 SULT1A2P50226 295 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 LYZP61626 148 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 ZNF616Q08AN1 781 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 KLF5Q13887 457 aaPredicted RBP5.3□□□□□ -1.56
RFC1-213ENST00000512275 TMEM41BQ5BJD5 291 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 SSX7Q7RTT5 188 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.3□□□□□ -1.56
RFC1-213ENST00000512275 OR5AU1Q8NGC0 362 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 OR4X2Q8NGF9 303 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 OR10G4Q8NGN3 311 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 OR10G9Q8NGN4 311 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 OR10G7Q8NGN6 311 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms