RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 CEACAM8P31997 349 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-209ENST00000512055 WFDC1Q9HC57 220 aa8.92□□□□□ -0.98
CPNE4-209ENST00000512055 LEPROTO15243 131 aa8.92□□□□□ -0.98
CPNE4-209ENST00000512055 POLR3KQ9Y2Y1 108 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-209ENST00000512055 RHOGP84095 191 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 LAGE3Q14657 143 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 FABP5P3A8MUU1 101 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 IGHV3-23P01764 117 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 CSRP1P21291 193 aaKnown RBP8.91□□□□□ -0.98
CPNE4-209ENST00000512055 STPG4Q8N801 248 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 H3BMG7 143 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 UPK2O00526 184 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 CYTL1Q9NRR1 136 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 FAM106CPP0CH98 169 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 ATP5G2Q06055 141 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 WIPF3A6NGB9 483 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 CD55P08174 381 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 CD7P09564 240 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 EGR2P11161 476 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-209ENST00000512055 CSTL1Q9H114 145 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 RNF115Q9Y4L5 304 aa8.91□□□□□ -0.98
CPNE4-209ENST00000512055 SHANK1Q9Y566 2161 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 ADARB2-AS1A8MUL3 147 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 NBL1P41271 181 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 RFNGQ9Y644 331 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 USF3Q68DE3 2245 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 ZNF503-AS2A6NEH8 195 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 PF4P02776 101 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 CD69Q07108 199 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 WNK2Q9Y3S1 2297 aa8.9□□□□□ -0.98
CPNE4-209ENST00000512055 TINCRA0A1B0GVN0 87 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 ID3Q02535 119 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 C20orf204Q6ZNR8 217 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 AMN1Q8IY45 258 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 LINC01549A6NIU2 74 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 D6R8Y8 96 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 NDUFA2O43678 99 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 SRSF2Q01130 221 aaKnown RBP8.9□□□□□ -0.99
CPNE4-209ENST00000512055 LINC01587Q99440 93 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 METRNQ9UJH8 293 aa8.9□□□□□ -0.99
CPNE4-209ENST00000512055 IGHG3P01860 377 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 CACNA1BQ00975 2339 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 TRAV12-2A0A075B6T6 113 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 FGF16O43320 207 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 AMTNQ6UX39 209 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 CHCHD5Q9BSY4 110 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 IFI27L2Q9H2X8 130 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 PCNX3Q9H6A9 2034 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 CCL3L1P16619 93 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 TSKUQ8WUA8 353 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 ITLN2Q8WWU7 325 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-209ENST00000512055 ZNF138P52744 262 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 ZNF525Q8N782 197 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 C20orf144Q9BQM9 153 aa8.89□□□□□ -0.99
CPNE4-209ENST00000512055 FREM1Q5H8C1 2179 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 hADV29S1A0JD25 119 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 TCRAP04437 139 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 MUC6Q6W4X9 2439 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 OR11H6Q8NGC7 330 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 GLMPQ8WWB7 406 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 CYYR1Q96J86 154 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 Q8NFD4 153 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 REG4Q9BYZ8 158 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 GTF3C1Q12789 2109 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 TRAV25A0A0B4J276 109 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 IGHV2-70P01814 119 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 LINC01559Q495D7 138 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 NTN5Q8WTR8 489 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-209ENST00000512055 SPATA25Q9BR10 227 aa8.88□□□□□ -0.99
CPNE4-209ENST00000512055 C17orf100A8MU93 164 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 FGF6P10767 208 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 LINC00205P59089 165 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 COLCA1Q6ZS62 124 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 EEF1AKMT3Q96AZ1 226 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 PTPRSQ13332 1948 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 MED13Q9UHV7 2174 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 MORN2Q502X0 79 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 PLA2G2CQ5R387 149 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 PRIMA1Q86XR5 153 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 RPRMLQ8N4K4 120 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 OR9G1Q8NH87 305 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 ASCL2Q99929 193 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 LIME1Q9H400 295 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 FNDC10F2Z333 226 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 DKK1O94907 266 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 TIMP3P35625 211 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 CDKN1AP38936 164 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 A0A1W2PPM0 123 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 RASL10AQ92737 203 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 SAA2-SAA4A0A096LPE2 208 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 SAA2P0DJI9 122 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-209ENST00000512055 SPACA3Q8IXA5 215 aa8.87□□□□□ -0.99
CPNE4-209ENST00000512055 FAM90A9PA6NNJ1 464 aa8.86□□□□□ -0.99
CPNE4-209ENST00000512055 Q6P435 159 aa8.86□□□□□ -0.99
CPNE4-209ENST00000512055 NCOA6Q14686 2063 aaPredicted RBP8.86□□□□□ -0.99
CPNE4-209ENST00000512055 LYNX1G3V0Z9 82 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms