RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 ID1P41134 155 aa14.61□□□□□ -0.07
SMAD1-211ENST00000512019 RAB5CP51148 216 aa14.61□□□□□ -0.07
SMAD1-211ENST00000512019 LCN15Q6UWW0 184 aa14.61□□□□□ -0.07
SMAD1-211ENST00000512019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.61□□□□□ -0.07
SMAD1-211ENST00000512019 HUWE1Q7Z6Z7 4374 aaKnown RBP14.6□□□□□ -0.07
SMAD1-211ENST00000512019 PYYP10082 97 aa14.6□□□□□ -0.07
SMAD1-211ENST00000512019 HIST1H1EP10412 219 aaKnown RBP14.6□□□□□ -0.07
SMAD1-211ENST00000512019 CMC4P56277 68 aaPredicted RBP14.6□□□□□ -0.07
SMAD1-211ENST00000512019 CD81P60033 236 aa14.6□□□□□ -0.07
SMAD1-211ENST00000512019 SNRPD3P62318 126 aaKnown RBP14.6□□□□□ -0.07
SMAD1-211ENST00000512019 UBE2L3P68036 154 aaKnown RBP14.6□□□□□ -0.07
SMAD1-211ENST00000512019 FAM213BQ8TBF2 198 aa14.6□□□□□ -0.07
SMAD1-211ENST00000512019 LRRC20Q8TCA0 184 aa14.6□□□□□ -0.07
SMAD1-211ENST00000512019 U3KQK5 164 aa14.6□□□□□ -0.07
SMAD1-211ENST00000512019 ISLRO14498 428 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 SOCS3O14543 225 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 HMGB3O15347 200 aaKnown RBP14.59□□□□□ -0.07
SMAD1-211ENST00000512019 STAG3L2P0CL84 134 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 STAG3L3P0CL85 134 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 PSMB3P49720 205 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 RNF141Q8WVD5 230 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 C16orf92Q96LL3 132 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 ASCL2Q99929 193 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 FAM110AQ9BQ89 295 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 SLC50A1Q9BRV3 221 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 SORL1Q92673 2214 aa14.59□□□□□ -0.07
SMAD1-211ENST00000512019 H3BQ15 152 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 EIF3GO75821 320 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMAD1-211ENST00000512019 CXorf1O96002 111 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 OR10J4P0C629 311 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 ARL14EPLP0DKL9 152 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 SULT1A2P50226 295 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 PDE6HQ13956 83 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 ZNF726P1Q15940 193 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 FXYD5Q96DB9 178 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 C17orf77Q96MU5 243 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 PLA2G2EQ9NZK7 142 aa14.58□□□□□ -0.08
SMAD1-211ENST00000512019 TRBV19A0A075B6N1 114 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 MAP1LC3B2A6NCE7 125 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 OR11H12B2RN74 326 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 ZNF253O75346 499 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 CD7P09564 240 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 NBEAP1P0C6P0 100 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 ZNF688P0C7X2 276 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 NHLRC4P0CG21 123 aaPredicted RBP14.57□□□□□ -0.08
SMAD1-211ENST00000512019 FHITP49789 147 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 SSX7Q7RTT5 188 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 ZNF503Q96F45 646 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 MAP1LC3BQ9GZQ8 125 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 MAP6D1Q9H9H5 199 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 ZNF586Q9NXT0 402 aa14.57□□□□□ -0.08
SMAD1-211ENST00000512019 SNRPCP09234 159 aaKnown RBP14.56□□□□□ -0.08
SMAD1-211ENST00000512019 ODF3L2Q3SX64 289 aa14.56□□□□□ -0.08
SMAD1-211ENST00000512019 ALKAL2Q6UX46 152 aa14.56□□□□□ -0.08
SMAD1-211ENST00000512019 FAM24BQ8N5W8 94 aa14.56□□□□□ -0.08
SMAD1-211ENST00000512019 BLNKQ8WV28 456 aa14.56□□□□□ -0.08
SMAD1-211ENST00000512019 H3BTX0 84 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 GCHFRP30047 84 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 PSG9Q00887 426 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 PSMG4Q5JS54 123 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 FAM74A1Q5RGS3 127 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 IQCF2Q8IXL9 164 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 SAT2Q96F10 170 aaPredicted RBP14.55□□□□□ -0.08
SMAD1-211ENST00000512019 LINC00052Q96N35 136 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 ZNF331Q9NQX6 463 aaPredicted RBP14.55□□□□□ -0.08
SMAD1-211ENST00000512019 TMEM167BQ9NRX6 74 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 CLEC5AQ9NY25 188 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 UBQLN2Q9UHD9 624 aa14.55□□□□□ -0.08
SMAD1-211ENST00000512019 DNAH7Q8WXX0 4024 aa14.54□□□□□ -0.08
SMAD1-211ENST00000512019 SLC17A3O00476 420 aa14.54□□□□□ -0.08
SMAD1-211ENST00000512019 H2AFB1P0C5Y9 115 aa14.54□□□□□ -0.08
SMAD1-211ENST00000512019 DEFB131AP59861 70 aa14.54□□□□□ -0.08
SMAD1-211ENST00000512019 SFT2D1Q8WV19 159 aa14.54□□□□□ -0.08
SMAD1-211ENST00000512019 AAMDCQ9H7C9 122 aa14.54□□□□□ -0.08
SMAD1-211ENST00000512019 DYNC2H1Q8NCM8 4307 aaKnown RBP14.54□□□□□ -0.08
SMAD1-211ENST00000512019 TRAV8-2A0A0B4J237 113 aa14.53□□□□□ -0.08
SMAD1-211ENST00000512019 Q8N1Y9 231 aa14.53□□□□□ -0.08
SMAD1-211ENST00000512019 MBD3L1Q8WWY6 194 aa14.53□□□□□ -0.08
SMAD1-211ENST00000512019 C19orf73Q9NVV2 129 aa14.53□□□□□ -0.08
SMAD1-211ENST00000512019 RYR2Q92736 4967 aa14.52□□□□□ -0.08
SMAD1-211ENST00000512019 ZNF705EA8MWA4 302 aaPredicted RBP14.52□□□□□ -0.09
SMAD1-211ENST00000512019 TEX46H3BTG2 121 aa14.52□□□□□ -0.09
SMAD1-211ENST00000512019 NDUFB4O95168 129 aa14.52□□□□□ -0.09
SMAD1-211ENST00000512019 FGF8P55075 233 aaPredicted RBP14.52□□□□□ -0.09
SMAD1-211ENST00000512019 IGFL4Q6B9Z1 124 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 TEX261Q6UWH6 196 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 LYPD1Q8N2G4 141 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 RNF182Q8N6D2 247 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 ZNF738Q8NE65 137 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 SUN5Q8TC36 379 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 WFDC10AQ9H1F0 79 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 PRELID1Q9Y255 219 aa14.51□□□□□ -0.09
SMAD1-211ENST00000512019 IFNA7P01567 189 aa14.5□□□□□ -0.09
SMAD1-211ENST00000512019 HBE1P02100 147 aa14.5□□□□□ -0.09
SMAD1-211ENST00000512019 PSG3Q16557 428 aa14.5□□□□□ -0.09
SMAD1-211ENST00000512019 APRG1Q8IVJ8 170 aa14.5□□□□□ -0.09
SMAD1-211ENST00000512019 DEFB125Q8N687 156 aa14.5□□□□□ -0.09
SMAD1-211ENST00000512019 MRPL53Q96EL3 112 aaKnown RBP14.5□□□□□ -0.09
SMAD1-211ENST00000512019 C20orf173Q96LM9 149 aa14.5□□□□□ -0.09
SMAD1-211ENST00000512019 TRAV1-1A0A0B4J248 108 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms