RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 MAP1LC3B2A6NCE7 125 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 K7EMT4 169 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 NDUFA4O00483 81 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 TSPAN4O14817 238 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 AGPAT2O15120 278 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 MT-CO2P00403 227 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 IGHV3-48P01763 117 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 BCL2P10415 239 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 ADCYAP1P18509 176 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 FCGR2BP31994 310 aaPredicted RBP4.33□□□□□ -1.72
RNF4-217ENST00000511892 CDC34P49427 236 aaPredicted RBP4.33□□□□□ -1.72
RNF4-217ENST00000511892 PSMB3P49720 205 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 SRSF3P84103 164 aaKnown RBP4.33□□□□□ -1.72
RNF4-217ENST00000511892 Q56UQ5 140 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 SOHLH1Q5JUK2 328 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 RBPMS2Q6ZRY4 209 aaKnown RBP4.33□□□□□ -1.72
RNF4-217ENST00000511892 SLC16A13Q7RTY0 426 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 OR10G9Q8NGN4 311 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 OR10G7Q8NGN6 311 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 TMEM170AQ8WVE7 144 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 MISP3Q96FF7 219 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 RNF2Q99496 336 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 MAP1LC3BQ9GZQ8 125 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 DAZ1Q9NQZ3 744 aaKnown RBP4.33□□□□□ -1.72
RNF4-217ENST00000511892 VAX2Q9UIW0 290 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 ARL2-SNX15V9GYD0 113 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 IGHV3-49A0A0A0MS15 119 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 IGHV7-4-1A0A0J9YVY3 117 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 A0A1W2PPV4 95 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 TMEM250H0YL14 139 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 CHEK1O14757 476 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 SRP19P09132 144 aaKnown RBP4.32□□□□□ -1.72
RNF4-217ENST00000511892 MFAP4P55083 255 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 B2MP61769 119 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 SELENOTP62341 195 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 AKR1C1Q04828 323 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 PNRC1Q12796 327 aaPredicted RBP4.32□□□□□ -1.72
RNF4-217ENST00000511892 RHEBQ15382 184 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 ZNF726P1Q15940 193 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 ODF3L2Q3SX64 289 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 FAM74A3Q4VXF1 159 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 LCN15Q6UWW0 184 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 RPP25LQ8N5L8 163 aaKnown RBP4.32□□□□□ -1.72
RNF4-217ENST00000511892 CLRN3Q8NCR9 226 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 MGST2Q99735 147 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 TXN2Q99757 166 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 SPAG8Q99932 426 aaPredicted RBP4.32□□□□□ -1.72
RNF4-217ENST00000511892 OVOL2Q9BRP0 275 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 C20orf24Q9BUV8 137 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 GGTLC1Q9BX51 225 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 TMEM231Q9H6L2 316 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 MRPL36Q9P0J6 103 aaKnown RBP4.32□□□□□ -1.72
RNF4-217ENST00000511892 SMPXQ9UHP9 88 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 PRELID1Q9Y255 219 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 PXMP4Q9Y6I8 212 aa4.32□□□□□ -1.72
RNF4-217ENST00000511892 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 IGHV3OR16-13A0A075B7E8 117 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 LOC102724200A0A096LPH7 203 aaPredicted RBP4.31□□□□□ -1.72
RNF4-217ENST00000511892 IGHV3-74A0A0B4J1X5 117 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 LCE6AA0A183 80 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 B4DEV8 164 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 C9JQL5 133 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 NUPL2O15504 423 aaKnown RBP4.31□□□□□ -1.72
RNF4-217ENST00000511892 CXorf1O96002 111 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 APOHP02749 345 aaPredicted RBP4.31□□□□□ -1.72
RNF4-217ENST00000511892 STAG3L2P0CL84 134 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 STAG3L3P0CL85 134 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 TAS2R45P59539 299 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 RHOBP62745 196 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 CCL20P78556 96 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 RELQ04864 619 aaPredicted RBP4.31□□□□□ -1.72
RNF4-217ENST00000511892 BTN1A1Q13410 526 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 ICAM4Q14773 271 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 MLANAQ16655 118 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 FAM90A2PQ658T7 463 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 FAM122CQ6P4D5 195 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 TOMM20LQ6UXN7 152 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 THAP8Q8NA92 274 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 TMEM116Q8NCL8 245 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 OR1L4Q8NGR5 311 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 RXFP4Q8TDU9 374 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 GATAD1Q8WUU5 269 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 RAB24Q969Q5 203 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 RHPN1-AS1Q9BWJ2 59 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 MRPL32Q9BYC8 188 aaKnown RBP4.31□□□□□ -1.72
RNF4-217ENST00000511892 FNDC4Q9H6D8 234 aaPredicted RBP4.31□□□□□ -1.72
RNF4-217ENST00000511892 VSIRQ9H7M9 311 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 SMCO4Q9NRQ5 59 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 GNG13Q9P2W3 67 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 U3KQE9 123 aa4.31□□□□□ -1.72
RNF4-217ENST00000511892 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
RNF4-217ENST00000511892 A0A087WWC5 75 aa4.3□□□□□ -1.72
RNF4-217ENST00000511892 ZFP92A6NM28 416 aa4.3□□□□□ -1.72
RNF4-217ENST00000511892 F6UZH7 168 aa4.3□□□□□ -1.72
RNF4-217ENST00000511892 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
RNF4-217ENST00000511892 PDE6DO43924 150 aa4.3□□□□□ -1.72
RNF4-217ENST00000511892 GNG7O60262 68 aa4.3□□□□□ -1.72
RNF4-217ENST00000511892 CLN5O75503 358 aa4.3□□□□□ -1.72
RNF4-217ENST00000511892 SCGB2A1O75556 95 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms