RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 PSMG4Q5JS54 123 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 PQLC2Q6ZP29 291 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 FAM167A-AS1Q96KT0 104 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 TUBA4BQ9H853 241 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 H3BQ15 152 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 H3BTX0 84 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 OR10J4P0C629 311 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 STAG3L2P0CL84 134 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 IGLC2P0DOY2 106 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 RAB5CP51148 216 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 DEFA6Q01524 100 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 DPPA3Q6W0C5 159 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 IQCF2Q8IXL9 164 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 FAM24BQ8N5W8 94 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 FAM213BQ8TBF2 198 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 SLC50A1Q9BRV3 221 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 MAP6D1Q9H9H5 199 aa11.07□□□□□ -0.64
RNF4-213ENST00000509388 CXorf1O96002 111 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 NBEAP1P0C6P0 100 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 PSG9Q00887 426 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 ODF3L2Q3SX64 289 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 Q8N1Y9 231 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 C17orf77Q96MU5 243 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 FAM110AQ9BQ89 295 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 ZNF586Q9NXT0 402 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 CLEC5AQ9NY25 188 aa11.06□□□□□ -0.64
RNF4-213ENST00000509388 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 SOCS3O14543 225 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 ARL14EPLP0DKL9 152 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 PDE6HQ13956 83 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 MRAPQ8TCY5 172 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 FXYD5Q96DB9 178 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 AAMDCQ9H7C9 122 aa11.05□□□□□ -0.64
RNF4-213ENST00000509388 MAP1LC3B2A6NCE7 125 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 K7EIL1 84 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 ZNF253O75346 499 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 H2AFB1P0C5Y9 115 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 FHITP49789 147 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 IGFL4Q6B9Z1 124 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 ZNF503Q96F45 646 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 MAP1LC3BQ9GZQ8 125 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 SRD5A3Q9H8P0 318 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 ZNF331Q9NQX6 463 aaPredicted RBP11.04□□□□□ -0.64
RNF4-213ENST00000509388 TMEM167BQ9NRX6 74 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 PLA2G2EQ9NZK7 142 aa11.04□□□□□ -0.64
RNF4-213ENST00000509388 TRAV8-2A0A0B4J237 113 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 TEX46H3BTG2 121 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 IGHV4-30-4P0DP06 118 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 GCHFRP30047 84 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 SULT1A2P50226 295 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
RNF4-213ENST00000509388 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 PSG3Q16557 428 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 EBLN2Q6P2I7 272 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 ZNF738Q8NE65 137 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 SFT2D1Q8WV19 159 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 SAT2Q96F10 170 aaPredicted RBP11.03□□□□□ -0.64
RNF4-213ENST00000509388 C19orf73Q9NVV2 129 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 SORL1Q92673 2214 aa11.03□□□□□ -0.64
RNF4-213ENST00000509388 SLC17A3O00476 420 aa11.02□□□□□ -0.65
RNF4-213ENST00000509388 FGF8P55075 233 aaPredicted RBP11.02□□□□□ -0.65
RNF4-213ENST00000509388 ZNF124Q15973 351 aa11.02□□□□□ -0.65
RNF4-213ENST00000509388 FAM74A1Q5RGS3 127 aa11.02□□□□□ -0.65
RNF4-213ENST00000509388 SSX7Q7RTT5 188 aa11.02□□□□□ -0.65
RNF4-213ENST00000509388 STHQ8IWL8 128 aa11.02□□□□□ -0.65
RNF4-213ENST00000509388 KNCNA6PVL3 124 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 ZNF705EA8MWA4 302 aaPredicted RBP11.01□□□□□ -0.65
RNF4-213ENST00000509388 NDUFB4O95168 129 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 HLA-DMBP28068 263 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 CSN1S1P47710 185 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 ACTL10Q5JWF8 245 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 MBD3L1Q8WWY6 194 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 RPUSD4Q96CM3 377 aaKnown RBP11.01□□□□□ -0.65
RNF4-213ENST00000509388 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
RNF4-213ENST00000509388 NOTCH1P46531 2555 aa11□□□□□ -0.65
RNF4-213ENST00000509388 LOC102724200A0A096LPH7 203 aaPredicted RBP11□□□□□ -0.65
RNF4-213ENST00000509388 A0A1B0GV50 99 aa11□□□□□ -0.65
RNF4-213ENST00000509388 ICAM4Q14773 271 aa11□□□□□ -0.65
RNF4-213ENST00000509388 FOXI2Q6ZQN5 318 aa11□□□□□ -0.65
RNF4-213ENST00000509388 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
RNF4-213ENST00000509388 CMTM2Q8TAZ6 248 aa11□□□□□ -0.65
RNF4-213ENST00000509388 Q9H3A6 140 aa11□□□□□ -0.65
RNF4-213ENST00000509388 FBN3Q75N90 2809 aa11□□□□□ -0.65
RNF4-213ENST00000509388 PGPA6NDG6 321 aa10.99□□□□□ -0.65
RNF4-213ENST00000509388 A8MZ25 164 aa10.99□□□□□ -0.65
RNF4-213ENST00000509388 HBE1P02100 147 aa10.99□□□□□ -0.65
RNF4-213ENST00000509388 RPL35AP18077 110 aaKnown RBP10.99□□□□□ -0.65
RNF4-213ENST00000509388 RXFP4Q8TDU9 374 aa10.99□□□□□ -0.65
RNF4-213ENST00000509388 MRPL53Q96EL3 112 aaKnown RBP10.99□□□□□ -0.65
RNF4-213ENST00000509388 TMPRSS5Q9H3S3 457 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms