RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TP53TG1Q9Y2A0 90 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 U3KQK5 164 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 A0A1W2PPV4 95 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 RPL35AP18077 110 aaKnown RBP6.76□□□□□ -1.33
NUP54-207ENST00000508583 C4BPBP20851 252 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 PSG9Q00887 426 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 KHDC3LQ587J8 217 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 ACTL10Q5JWF8 245 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 AKAP14Q86UN6 197 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 TCTE3Q8IZS6 198 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 FAM24BQ8N5W8 94 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 HSD17B11Q8NBQ5 300 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 OR2G3Q8NGZ4 309 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 CITED4Q96RK1 184 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 ARPC5LQ9BPX5 153 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 WFDC1Q9HC57 220 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 FUT9Q9Y231 359 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
NUP54-207ENST00000508583 KANTRA0A1W2PQU2 76 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 G3V3Q6 166 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 OR7C2O60412 319 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 DUSP14O95147 198 aaKnown RBP6.75□□□□□ -1.33
NUP54-207ENST00000508583 IGLC2P0DOY2 106 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 HIST1H1EP10412 219 aaKnown RBP6.75□□□□□ -1.33
NUP54-207ENST00000508583 PQLC2Q6ZP29 291 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 TRPT1Q86TN4 253 aaKnown RBP6.75□□□□□ -1.33
NUP54-207ENST00000508583 KCNRGQ8N5I3 272 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 ZNF738Q8NE65 137 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 CLUHP3Q96NS8 147 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 RCHY1Q96PM5 261 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 PAXXQ9BUH6 204 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
NUP54-207ENST00000508583 AAMDCQ9H7C9 122 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 PRELID1Q9Y255 219 aa6.75□□□□□ -1.33
NUP54-207ENST00000508583 KNCNA6PVL3 124 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 H3BMM0 161 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
NUP54-207ENST00000508583 PFDN1O60925 122 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 CA1P00915 261 aaPredicted RBP6.74□□□□□ -1.33
NUP54-207ENST00000508583 ATP6V0CP27449 155 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 PSG3Q16557 428 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 GCSAMLQ5JQS6 135 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 MORN5Q5VZ52 161 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 RPL7L1Q6DKI1 246 aaKnown RBP6.74□□□□□ -1.33
NUP54-207ENST00000508583 OR10G4Q8NGN3 311 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 OR10G9Q8NGN4 311 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 OR10G7Q8NGN6 311 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 MRPL53Q96EL3 112 aaKnown RBP6.74□□□□□ -1.33
NUP54-207ENST00000508583 HYLS1Q96M11 299 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 SLC25A2Q9BXI2 301 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 OR51M1Q9H341 326 aa6.74□□□□□ -1.33
NUP54-207ENST00000508583 ZNF331Q9NQX6 463 aaPredicted RBP6.74□□□□□ -1.33
NUP54-207ENST00000508583 TRBV19A0A075B6N1 114 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 TRAV5A0A0B4J249 113 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 A0A0J9YX75 114 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 SMLR1H3BR10 107 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 BCL2L11O43521 198 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 SPRY2O43597 315 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 C1QBP02746 253 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 AMBPP02760 352 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 CDC34P49427 236 aaPredicted RBP6.73□□□□□ -1.33
NUP54-207ENST00000508583 UBE2L3P68036 154 aaKnown RBP6.73□□□□□ -1.33
NUP54-207ENST00000508583 ZNF124Q15973 351 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 FAM74A1Q5RGS3 127 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 AKR1C8PQ5T2L2 129 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 EIF5AL1Q6IS14 154 aaKnown RBP6.73□□□□□ -1.33
NUP54-207ENST00000508583 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 LYPD1Q8N2G4 141 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 OR4B1Q8NGF8 309 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 OR10J6PQ8NGY7 276 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 ST6GAL2Q96JF0 529 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 ACTR3CQ9C0K3 210 aaPredicted RBP6.73□□□□□ -1.33
NUP54-207ENST00000508583 PPP1R14DQ9NXH3 145 aa6.73□□□□□ -1.33
NUP54-207ENST00000508583 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 NBEAP1P0C6P0 100 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 CSN1S1P47710 185 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
NUP54-207ENST00000508583 DEFB135Q30KP9 77 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 FAM122CQ6P4D5 195 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 BLNKQ8WV28 456 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 RNF141Q8WVD5 230 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 RPUSD4Q96CM3 377 aaKnown RBP6.72□□□□□ -1.33
NUP54-207ENST00000508583 RNF183Q96D59 192 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 SAT2Q96F10 170 aaPredicted RBP6.72□□□□□ -1.33
NUP54-207ENST00000508583 FAM167A-AS1Q96KT0 104 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 WWC2-AS2Q96NR7 200 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 ZNF471Q9BX82 626 aaPredicted RBP6.72□□□□□ -1.33
NUP54-207ENST00000508583 ZNF586Q9NXT0 402 aa6.72□□□□□ -1.33
NUP54-207ENST00000508583 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.34
NUP54-207ENST00000508583 UMAD1C9J7I0 102 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 H3BQ15 152 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 CXorf1O96002 111 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 OR10J4P0C629 311 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 PYYP10082 97 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 TPT1P13693 172 aaKnown RBP6.71□□□□□ -1.34
NUP54-207ENST00000508583 RAB2AP61019 212 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 ZFP69Q49AA0 526 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms