RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 M0R2N4 97 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 TAS2R30P59541 319 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 DAD1P61803 113 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 ARL16Q0P5N6 197 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 LGALS9BQ3B8N2 356 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 TMEM88Q6PEY1 159 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 TEPPQ6URK8 271 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 OR10P1Q8NGE3 313 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 ARL6Q9H0F7 186 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 ARV1Q9H2C2 271 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 NPVFQ9HCQ7 196 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 MGAT4CQ9UBM8 478 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 TRAV12-2A0A075B6T6 113 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 C7orf66A4D0T2 115 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 MBPP02686 304 aaPredicted RBP9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 TSPOP30536 169 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 Q6ZR54 194 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 OR8A1Q8NGG7 326 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 C20orf85Q9H1P6 137 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 GSKIPQ9P0R6 139 aa9.19□□□□□ -0.94
HMGCS1-205ENST00000508319 IGLV2-18A0A075B6J9 118 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 PRSS29PA6NIE9 313 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 LYRM9A8MSI8 78 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 CCSO14618 274 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 PLA2G10O15496 165 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 PRB4P10163 310 aaPredicted RBP9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 CXCL2P19875 107 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 HIST1H1AQ02539 215 aaPredicted RBP9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 PSG3Q16557 428 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 PXDC1Q5TGL8 231 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 ZNF546Q86UE3 836 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 GGACTQ9BVM4 153 aa9.18□□□□□ -0.94
HMGCS1-205ENST00000508319 AGPAT2O15120 278 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 AZU1P20160 251 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 B2MP61769 119 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 CNPY1Q3B7I2 92 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 RNF212Q495C1 297 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 MORN5Q5VZ52 161 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 LCN15Q6UWW0 184 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 LINC00305Q7Z4B0 112 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 S100A7AQ86SG5 101 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 MGST2Q99735 147 aa9.17□□□□□ -0.94
HMGCS1-205ENST00000508319 SLC17A3O00476 420 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 GOSR2O14653 212 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 LYRM1O43325 122 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 RHOBP62745 196 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 C15orf53Q8NAA6 179 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 LRRC20Q8TCA0 184 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 TMEM37Q8WXS4 190 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 ZNF331Q9NQX6 463 aaPredicted RBP9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 RNF24Q9Y225 148 aa9.16□□□□□ -0.94
HMGCS1-205ENST00000508319 COX7A2P2O60397 106 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 SNRPCP09234 159 aaKnown RBP9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 DEFB130BP0DP73 79 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 DEFB130AP0DP74 79 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 CDKN1BP46527 198 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 TAS2R60P59551 318 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 OPCMLQ14982 345 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 FCN2Q15485 313 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 LINC01587Q99440 93 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 SLC50A1Q9BRV3 221 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 C11orf1Q9H5F2 150 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 NUDT15Q9NV35 164 aa9.15□□□□□ -0.94
HMGCS1-205ENST00000508319 TRAV6A0A075B6T7 132 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 H3BTX0 84 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 TCRBP04435 133 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 IGLC2P0DOY2 106 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 ZNF846Q147U1 533 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 KIR3DS1Q14943 382 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 RNASE8Q8TDE3 154 aaKnown RBP9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 ZNF431Q8TF32 576 aaPredicted RBP9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 SEC22CQ9BRL7 303 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 PPP1R14DQ9NXH3 145 aa9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 LSM5Q9Y4Y9 91 aaKnown RBP9.14□□□□□ -0.95
HMGCS1-205ENST00000508319 FAM25EA8MYX2 175 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 L7N2F9 121 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 CST7O76096 145 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 HTN1P15515 57 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 CAMLGP49069 296 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 CAV2P51636 162 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 VAMP2P63027 116 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 C10orf113Q5VZT2 155 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 MIC13Q5XKP0 118 aa9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 TMEM263Q8WUH6 116 aaKnown RBP9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 PARD6GQ9BYG4 376 aaPredicted RBP9.13□□□□□ -0.95
HMGCS1-205ENST00000508319 F5H768 121 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 H3BQ15 152 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 H7BYZ3 331 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 ATP5G1P05496 136 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 ATP5G3P48201 142 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 FAM3BP58499 235 aaPredicted RBP9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 VWC2Q2TAL6 325 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 GFI1BQ5VTD9 330 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms