RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 LINC01549A6NIU2 74 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 TMEM150CB9EJG8 249 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 POLR2LP62875 67 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 LY6KQ17RY6 165 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 TMEM52BQ4KMG9 183 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 ZFP2Q6ZN57 461 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 FOXL2NBQ6ZUU3 175 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 Q6ZVL8 140 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 LINC00527Q9UJ94 153 aa8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 KLF13Q9Y2Y9 288 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-210ENST00000508216 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 H3BMM0 161 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 PLA2G5P39877 138 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 EDDM3BP56851 147 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 WDR31Q8NA23 367 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 UBE2WQ96B02 151 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 FAM173AQ9BQD7 235 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 CALYQ9NYX4 217 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 AGRNO00468 2067 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 MYO9BQ13459 2157 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 A0A096LPE4 126 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 A0A1W2PPZ6 126 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 PYYP10082 97 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 LOXP28300 417 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 TNFRSF4P43489 277 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 LOXL1Q08397 574 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 FAM27E3Q08E93 113 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 OR1C1Q15619 314 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 VKORC1Q9BQB6 163 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 AAMDCQ9H7C9 122 aa8.53□□□□□ -1.04
PDLIM5-210ENST00000508216 TRBV10-2A0A0K0K1G8 114 aa8.52□□□□□ -1.05
PDLIM5-210ENST00000508216 H3BT86 120 aa8.52□□□□□ -1.05
PDLIM5-210ENST00000508216 CCL8P80075 99 aa8.52□□□□□ -1.05
PDLIM5-210ENST00000508216 IZUMO4Q1ZYL8 232 aa8.52□□□□□ -1.05
PDLIM5-210ENST00000508216 NEXN-AS1Q8NBZ9 246 aa8.52□□□□□ -1.05
PDLIM5-210ENST00000508216 FAM110DQ8TAY7 271 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-210ENST00000508216 DEPPQ9NTK1 212 aa8.52□□□□□ -1.05
PDLIM5-210ENST00000508216 IGKV1-8A0A0C4DH67 115 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 PRSS46E5RG02 174 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 H7C1H1 209 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 ZNF138P52744 262 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 HES3Q5TGS1 186 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 LINC00311Q8N616 119 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 NABP1Q96AH0 204 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 PRDM14Q9GZV8 571 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 DPH3P1Q9H4G8 78 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 C16orf95Q9H693 158 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 TPSG1Q9NRR2 321 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 DKK2Q9UBU2 259 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
PDLIM5-210ENST00000508216 hADV29S1A0JD25 119 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 HSPB6O14558 160 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 IGKV1D-16P01601 117 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 ZNF56Q15929 161 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 NDUFA11Q86Y39 141 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 DSCR8Q96T75 97 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 NCBP2LA6PVI3 153 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 PEX7O00628 323 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 ELANEP08246 267 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 SCAMP4Q969E2 229 aa8.5□□□□□ -1.05
PDLIM5-210ENST00000508216 TMSB15BA0A087X1C1 80 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 H3BVH4 76 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 UPK2O00526 184 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 MYCNOSP40205 109 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 UBE2L3P68036 154 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 TMEM155Q4W5P6 130 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 OVCA2Q8WZ82 227 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 NXT2Q9NPJ8 142 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 LRP4O75096 1905 aa8.49□□□□□ -1.05
PDLIM5-210ENST00000508216 C5orf63A6NC05 138 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 OVOL3O00110 214 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 SLC25A16P16260 332 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 FKBP2P26885 142 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 LOXL3P58215 753 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 RIGQ13278 110 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 VMA21Q3ZAQ7 101 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 C22orf39Q6P5X5 142 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 MAPKAPK5-AS1Q8N8E1 139 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 ZNF576Q9H609 170 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 BEX4Q9NWD9 120 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 WNT10BO00744 389 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 MRPS12O15235 138 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 ATXN8Q156A1 80 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 LINC01620Q4KN68 170 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 MIC13Q5XKP0 118 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 COPS9Q8WXC6 57 aa8.48□□□□□ -1.05
PDLIM5-210ENST00000508216 IGKV1-6A0A0C4DH72 117 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 A0A0G2JNJ9 132 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 A0A1W2PQU0 124 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 IGLV2-14P01704 120 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 PLNP26678 52 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 CDAP32320 146 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms