RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 Q56UQ5 140 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 SPATA12Q7Z6I5 190 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 ZNF562Q6V9R5 426 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 PSG8Q9UQ74 426 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 ARPC1AQ92747 370 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 C8orf49Q96NF6 230 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 MAP1AP78559 2803 aaPredicted RBP8.56□□□□□ -1.04
LIN54-207ENST00000508171 CHEK1O14757 476 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 NDUFB8O95169 186 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 MFAP4P55083 255 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 PSG3Q16557 428 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 C16orf54Q6UWD8 224 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 LINC00173Q6ZV60 143 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 TMEM75Q8N9X5 138 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 NEU4Q8WWR8 484 aaPredicted RBP8.56□□□□□ -1.04
LIN54-207ENST00000508171 SOX21Q9Y651 276 aaPredicted RBP8.56□□□□□ -1.04
LIN54-207ENST00000508171 IGHV3OR16-8A0A075B7F1 116 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 LOC102724200A0A096LPH7 203 aaPredicted RBP8.56□□□□□ -1.04
LIN54-207ENST00000508171 FAM231BA6NCW3 169 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 M0QZK8 103 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 ARMS2P0C7Q2 107 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 FAM120AOSQ5T036 256 aa8.56□□□□□ -1.04
LIN54-207ENST00000508171 ITPR1Q14643 2758 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 IGHV3-35A0A0C4DH35 117 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 OR2T8A6NH00 312 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 NPIPB5A8MRT5 1133 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 HAX1O00165 279 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 TTC9CQ8N5M4 171 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 RNF24Q9Y225 148 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 ZFP30Q9Y2G7 519 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
LIN54-207ENST00000508171 LINC00614P0C842 121 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 EGR2P11161 476 aaPredicted RBP8.55□□□□□ -1.04
LIN54-207ENST00000508171 ZNF25P17030 456 aaPredicted RBP8.55□□□□□ -1.04
LIN54-207ENST00000508171 TFPI2P48307 235 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 LYPD1Q8N2G4 141 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 Q8N6K4 173 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 TPPP3Q9BW30 176 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 C21orf62Q9NYP8 219 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 C1RLQ9NZP8 487 aa8.55□□□□□ -1.04
LIN54-207ENST00000508171 TRAV30A0A087WSZ9 112 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 TRBV6-1A0A0K0K1D8 114 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 K7EQM0 130 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 Q6ZN92 141 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 TXN2Q99757 166 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 NDFIP1Q9BT67 221 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 UQCR10Q9UDW1 63 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.54□□□□□ -1.04
LIN54-207ENST00000508171 A0A1B0GUT8 65 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 CSN3P07498 182 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 CTSGP08311 255 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 TMEM11P17152 192 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 UCNP55089 124 aa8.54□□□□□ -1.04
LIN54-207ENST00000508171 COL25A1Q9BXS0 654 aaPredicted RBP8.54□□□□□ -1.04
LIN54-207ENST00000508171 SPTAN1Q13813 2472 aaKnown RBP8.53□□□□□ -1.04
LIN54-207ENST00000508171 IGHV7-81A0A0B4J1V7 117 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 CCDC144NLQ6NUI1 221 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
LIN54-207ENST00000508171 TMSB15BA0A087X1C1 80 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 IGLL1P15814 213 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 C1orf122Q6ZSJ8 110 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 DTX2Q86UW9 622 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 TMEM70Q9BUB7 260 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 MCRIP2Q9BUT9 160 aaKnown RBP8.53□□□□□ -1.04
LIN54-207ENST00000508171 AAMDCQ9H7C9 122 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 LPAR2Q9HBW0 351 aa8.53□□□□□ -1.04
LIN54-207ENST00000508171 TRAV9-2A0A087WT02 112 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 IGKV2-40A0A087WW87 121 aaPredicted RBP8.52□□□□□ -1.05
LIN54-207ENST00000508171 IGKV2D-40P01614 121 aaPredicted RBP8.52□□□□□ -1.05
LIN54-207ENST00000508171 LY6DQ14210 128 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 CHCHD1Q96BP2 118 aaKnown RBP8.52□□□□□ -1.05
LIN54-207ENST00000508171 SIRPDQ9H106 197 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 LEPROTL1O95214 131 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 HLA-DMBP28068 263 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
LIN54-207ENST00000508171 EBI3Q14213 229 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 MUC21Q5SSG8 566 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 KLHDC1Q8N7A1 406 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 STPG4Q8N801 248 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 Q8N9W7 124 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 ZNF48Q96MX3 618 aaPredicted RBP8.52□□□□□ -1.05
LIN54-207ENST00000508171 TMEM208Q9BTX3 173 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 TMUB1Q9BVT8 246 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 THYN1Q9P016 225 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 TP73-AS1Q9UF72 201 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 TIMM8BQ9Y5J9 83 aaPredicted RBP8.52□□□□□ -1.05
LIN54-207ENST00000508171 SMAD5-AS1Q9Y6J3 95 aa8.52□□□□□ -1.05
LIN54-207ENST00000508171 PDE6HQ13956 83 aa8.51□□□□□ -1.05
LIN54-207ENST00000508171 AJUBAQ96IF1 538 aa8.51□□□□□ -1.05
LIN54-207ENST00000508171 SYS1-DBNDD2H3BUS1 97 aa8.51□□□□□ -1.05
LIN54-207ENST00000508171 TSPOP30536 169 aa8.51□□□□□ -1.05
LIN54-207ENST00000508171 RIGQ13278 110 aa8.51□□□□□ -1.05
LIN54-207ENST00000508171 MINOS1Q5TGZ0 78 aa8.51□□□□□ -1.05
LIN54-207ENST00000508171 UBTD1Q9HAC8 227 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms