RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SIGLEC8Q9NYZ4 499 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 MRPL36Q9P0J6 103 aaKnown RBP3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 TIMM8BQ9Y5J9 83 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 INSIG2Q9Y5U4 225 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 CACNA1GO43497 2377 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 DSCAML1Q8TD84 2053 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 TRAV8-1A0A0A6YYK1 113 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 IGHV1-3A0A0C4DH29 117 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 LINC01546A6NGU7 62 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 TEX22C9J3V5 150 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 H3BUT2 72 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 I3L2K1 104 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 CDX4O14627 284 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 TNFRSF13BO14836 293 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 CIDEAO60543 219 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 CNIH1O95406 144 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 COL8A2P25067 703 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 LOXP28300 417 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 IFI27P40305 119 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 UQCRFS1P47985 274 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 RAB9AP51151 201 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 MFAP4P55083 255 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 CACNG7P62955 275 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 ADIPOQQ15848 244 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 TAL2Q16559 108 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 ASPHD1Q5U4P2 390 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 LYZL1Q6UWQ5 148 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 NEGR1Q7Z3B1 354 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 EXOC3-AS1Q8N2X6 119 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 FAM57AQ8TBR7 257 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 IGFBPL1Q8WX77 278 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 RPEQ96AT9 228 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 RNF125Q96EQ8 232 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 TPPP3Q9BW30 176 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 THYN1Q9P016 225 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 ZNRD1Q9P1U0 126 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 RALYQ9UKM9 306 aaKnown RBP3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 FAM215AQ9Y5M1 114 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 SPCS1Q9Y6A9 102 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 CEP290O15078 2479 aa3.92□□□□□ -1.78
HMGB3P16-201ENST00000508037 WI2-2373I1.2A0A1W2PRP0 233 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 TMEM238C9JI98 176 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 BUB1B-PAK6H3BSN5 160 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 H3BTX0 84 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 GNG7O60262 68 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 SH2D1AO60880 128 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 NDUFS7O75251 213 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 IGKV1-17P01599 117 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 IL4P05112 153 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 WT1P19544 449 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 EVI2AP22794 236 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 CD24P25063 80 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 FCER1GP30273 86 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 NMUP48645 174 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 TWIST1Q15672 202 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 MRGPRG-AS1Q2M3A8 158 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 DEFB109BQ30KR1 87 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 MRPL51Q4U2R6 128 aaKnown RBP3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 ADAMTSL5Q6ZMM2 481 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 ERASQ7Z444 233 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 CCL17Q92583 94 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 ARPC1AQ92747 370 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 CHTOPQ9Y3Y2 248 aaKnown RBP3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 MKI67P46013 3256 aaKnown RBP3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 AHCTF1Q8WYP5 2266 aa3.91□□□□□ -1.78
HMGB3P16-201ENST00000508037 MED13Q9UHV7 2174 aa3.9□□□□□ -1.78
HMGB3P16-201ENST00000508037 DSCAMO60469 2012 aa3.9□□□□□ -1.78
HMGB3P16-201ENST00000508037 A0A096LNJ9 63 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGHV3-21A0A0B4J1V1 117 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGHV3-72A0A0B4J1Y9 119 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 LOC389332A0A1B0GUA5 103 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 RBAKDNA6NC62 111 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 FABP5P3A8MUU1 101 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 F8W1H4 67 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 K7EIM0 57 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 OVOL3O00110 214 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 NDUFS8O00217 210 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRRG2O14669 202 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 NBR2O15453 112 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 DPM2O94777 84 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 NCR2O95944 276 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGLV1-47P01700 117 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGKCP01834 107 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 FTH1P19P0C7X4 201 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 FCGR2BP31994 310 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 DIAPH2-AS1Q14236 149 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 LYPD2Q6UXB3 125 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZNF562Q6V9R5 426 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 Q6ZS92 163 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 AMN1Q8IY45 258 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZNF491Q8N8L2 437 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 RNASE6Q93091 150 aaKnown RBP3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 ASCL2Q99929 193 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 CNFNQ9BYD5 112 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 FBXL15Q9H469 300 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 HEATR1Q9H583 2144 aaKnown RBP3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 TNCP24821 2201 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 DYSFO75923 2080 aa3.9□□□□□ -1.79
HMGB3P16-201ENST00000508037 FAM186AA6NE01 2351 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms