RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 S100PP25815 95 aa12.74□□□□□ -0.37
DDX41-207ENST00000507900 UBE2G1P62253 170 aa12.74□□□□□ -0.37
DDX41-207ENST00000507900 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
DDX41-207ENST00000507900 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
DDX41-207ENST00000507900 TRAV34A0A0B4J273 112 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 GGCTO75223 188 aaKnown RBP12.73□□□□□ -0.37
DDX41-207ENST00000507900 BAGE2Q86Y30 109 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 C1QL4Q86Z23 238 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 AAMDCQ9H7C9 122 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 YAE1D1Q9NRH1 226 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 OSTCQ9NRP0 149 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 AKAP9Q99996 3911 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 LTAP01374 205 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 KCNIP4Q6PIL6 250 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 SERTAD4Q9NUC0 356 aa12.73□□□□□ -0.37
DDX41-207ENST00000507900 PEF1Q9UBV8 284 aaKnown RBP12.73□□□□□ -0.37
DDX41-207ENST00000507900 SERTM2A0A1B0GWG4 89 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 MEOX2P50222 304 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 FOXL1Q12952 345 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 OR5I1Q13606 314 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 C10orf99Q6UWK7 81 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 UNQ9165/PRO28630Q6UXU0 137 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 TMEM75Q8N9X5 138 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 FAM210BQ96KR6 192 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 MLST8Q9BVC4 326 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 MLXQ9UH92 298 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
DDX41-207ENST00000507900 DNAJC9-AS1A6NH13 148 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 IGLV2-11P01706 119 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 APOHP02749 345 aaPredicted RBP12.71□□□□□ -0.37
DDX41-207ENST00000507900 ERVFC1-1P60608 527 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.37
DDX41-207ENST00000507900 SCGB2A2Q13296 93 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 C16orf54Q6UWD8 224 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 FAM231DQ6ZW35 169 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 DUX5Q96PT3 197 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 ZNF331Q9NQX6 463 aaPredicted RBP12.71□□□□□ -0.37
DDX41-207ENST00000507900 V9GYV3 84 aa12.71□□□□□ -0.37
DDX41-207ENST00000507900 C1orf196B1AJZ1 125 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 Q86TA4 180 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 GLMPQ8WWB7 406 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 BTF3L4Q96K17 158 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 IL36BQ9NZH7 164 aa12.7□□□□□ -0.38
DDX41-207ENST00000507900 TRAV9-1A0A075B6T8 112 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 K7EQM0 130 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 MGST1P10620 155 aaKnown RBP12.69□□□□□ -0.38
DDX41-207ENST00000507900 RAB5BP61020 215 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 GPHB5Q86YW7 130 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 SLC50A1Q9BRV3 221 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 ZNF785A8K8V0 405 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 K7EMT4 169 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 M0R3E3 92 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 ZNF207O43670 478 aaKnown RBP12.69□□□□□ -0.38
DDX41-207ENST00000507900 TYMSP04818 313 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
DDX41-207ENST00000507900 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
DDX41-207ENST00000507900 CSN1S1P47710 185 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 IBA57Q5T440 356 aaKnown RBP12.69□□□□□ -0.38
DDX41-207ENST00000507900 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 NHLRC2Q8NBF2 726 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 UBE2E2Q96LR5 201 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 BIN3Q9NQY0 253 aa12.69□□□□□ -0.38
DDX41-207ENST00000507900 FASNP49327 2511 aaKnown RBP12.68□□□□□ -0.38
DDX41-207ENST00000507900 FBLL1A6NHQ2 334 aaKnown RBP12.68□□□□□ -0.38
DDX41-207ENST00000507900 LGALS1P09382 135 aaKnown RBP12.68□□□□□ -0.38
DDX41-207ENST00000507900 PSG3Q16557 428 aa12.68□□□□□ -0.38
DDX41-207ENST00000507900 RNASE7Q9H1E1 156 aaKnown RBP12.68□□□□□ -0.38
DDX41-207ENST00000507900 SRD5A3Q9H8P0 318 aa12.68□□□□□ -0.38
DDX41-207ENST00000507900 TLN2Q9Y4G6 2542 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 TRAV8-1A0A0A6YYK1 113 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 A0A1W2PPQ1 181 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 A0A1W2PS18 150 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 ZNF320A2RRD8 509 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 ESM1Q9NQ30 184 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 DAZ1Q9NQZ3 744 aaKnown RBP12.67□□□□□ -0.38
DDX41-207ENST00000507900 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 ZFP30Q9Y2G7 519 aa12.67□□□□□ -0.38
DDX41-207ENST00000507900 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
DDX41-207ENST00000507900 FAM181BA6NEQ2 426 aa12.66□□□□□ -0.38
DDX41-207ENST00000507900 FAM106AQ4KMX7 169 aa12.66□□□□□ -0.38
DDX41-207ENST00000507900 Q6ZSV7 163 aa12.66□□□□□ -0.38
DDX41-207ENST00000507900 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
DDX41-207ENST00000507900 PSG8Q9UQ74 426 aa12.66□□□□□ -0.38
DDX41-207ENST00000507900 HECTD1Q9ULT8 2610 aa12.66□□□□□ -0.38
DDX41-207ENST00000507900 IGHV3OR16-13A0A075B7E8 117 aa12.65□□□□□ -0.38
DDX41-207ENST00000507900 IGHV3-74A0A0B4J1X5 117 aa12.65□□□□□ -0.38
DDX41-207ENST00000507900 IGHV7-4-1A0A0J9YVY3 117 aa12.65□□□□□ -0.38
DDX41-207ENST00000507900 FAM3BP58499 235 aaPredicted RBP12.65□□□□□ -0.38
DDX41-207ENST00000507900 RPEL1Q2QD12 228 aa12.65□□□□□ -0.38
DDX41-207ENST00000507900 PRNTQ86SH4 94 aa12.65□□□□□ -0.38
DDX41-207ENST00000507900 CLEC5AQ9NY25 188 aa12.65□□□□□ -0.38
DDX41-207ENST00000507900 CHEK1O14757 476 aa12.64□□□□□ -0.39
DDX41-207ENST00000507900 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms