RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 CST7O76096 145 aa11.4□□□□□ -0.58
HOXC4-203ENST00000507650 HBE1P02100 147 aa11.4□□□□□ -0.58
HOXC4-203ENST00000507650 AZU1P20160 251 aa11.4□□□□□ -0.58
HOXC4-203ENST00000507650 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
HOXC4-203ENST00000507650 OR8A1Q8NGG7 326 aa11.4□□□□□ -0.58
HOXC4-203ENST00000507650 NDUFA13Q9P0J0 144 aa11.4□□□□□ -0.58
HOXC4-203ENST00000507650 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 FAM25EA8MYX2 175 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 H3BTX0 84 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 BOLA2-SMG1P6H3BVE0 249 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 DUSP14O95147 198 aaKnown RBP11.39□□□□□ -0.59
HOXC4-203ENST00000507650 OPCMLQ14982 345 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 PSG3Q16557 428 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 LINC00305Q7Z4B0 112 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 ZNF546Q86UE3 836 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 C12orf45Q8N5I9 185 aaPredicted RBP11.39□□□□□ -0.59
HOXC4-203ENST00000507650 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 CCDC32Q9BV29 185 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 GGACTQ9BVM4 153 aa11.39□□□□□ -0.59
HOXC4-203ENST00000507650 PARD6GQ9BYG4 376 aaPredicted RBP11.39□□□□□ -0.59
HOXC4-203ENST00000507650 ZNF331Q9NQX6 463 aaPredicted RBP11.39□□□□□ -0.59
HOXC4-203ENST00000507650 H3BQ15 152 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 H2AFB2P0C5Z0 115 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 IGLC2P0DOY2 106 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
HOXC4-203ENST00000507650 OXA1LQ15070 435 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 VWC2Q2TAL6 325 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 C2orf50Q96LR7 162 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 WDR83OSQ9Y284 106 aa11.38□□□□□ -0.59
HOXC4-203ENST00000507650 DNAH11Q96DT5 4516 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 TRAV5A0A0B4J249 113 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 C5orf51A6NDU8 294 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 GOSR2O14653 212 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 INSP01308 110 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 IFITM3Q01628 133 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 RAB32Q13637 225 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 FCN2Q15485 313 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 PXDC1Q5TGL8 231 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 NRARPQ7Z6K4 114 aa11.37□□□□□ -0.59
HOXC4-203ENST00000507650 SAT2Q96F10 170 aaPredicted RBP11.37□□□□□ -0.59
HOXC4-203ENST00000507650 A0A1B0GVY2 172 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 L7N2F9 121 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 HTN3P15516 51 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 S100A7P31151 101 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 CAV2P51636 162 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 VAMP2P63027 116 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 ASAH1Q13510 395 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 ZNF846Q147U1 533 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 TMEM88Q6PEY1 159 aa11.36□□□□□ -0.59
HOXC4-203ENST00000507650 RPUSD4Q96CM3 377 aaKnown RBP11.36□□□□□ -0.59
HOXC4-203ENST00000507650 LYRM2Q9NU23 88 aaPredicted RBP11.36□□□□□ -0.59
HOXC4-203ENST00000507650 RTL8CO15255 209 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 COX7A2P2O60397 106 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 P0DMU3 169 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 CXCL2P19875 107 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 CAMLGP49069 296 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 BCAP31P51572 246 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 C10orf113Q5VZT2 155 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 TMEM252Q8N6L7 170 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 TMEM208Q9BTX3 173 aa11.35□□□□□ -0.59
HOXC4-203ENST00000507650 UBE2L5PA0A1B0GUS4 154 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 FAM240BA0A1B0GVZ2 78 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 M0R2N4 97 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 TSPOP30536 169 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 S100A10P60903 97 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 DAD1P61803 113 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 LCN15Q6UWW0 184 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 UQCC1Q9NVA1 299 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 ZNF586Q9NXT0 402 aa11.34□□□□□ -0.59
HOXC4-203ENST00000507650 SULT1A1P50225 295 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 RHOBP62745 196 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 Q6ZR54 194 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 LINC00299Q6ZSB3 139 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 BPIFA4PQ86YQ2 179 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 FAM210BQ96KR6 192 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 SLC50A1Q9BRV3 221 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 DNAJC4Q9NNZ3 241 aa11.33□□□□□ -0.6
HOXC4-203ENST00000507650 A6NHS1 94 aa11.32□□□□□ -0.6
HOXC4-203ENST00000507650 SIX6O95475 246 aa11.32□□□□□ -0.6
HOXC4-203ENST00000507650 GCSAMLQ5JQS6 135 aa11.32□□□□□ -0.6
HOXC4-203ENST00000507650 LRRC20Q8TCA0 184 aa11.32□□□□□ -0.6
HOXC4-203ENST00000507650 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
HOXC4-203ENST00000507650 KRTAP17-1Q9BYP8 105 aa11.32□□□□□ -0.6
HOXC4-203ENST00000507650 SLC39A9Q9NUM3 307 aa11.32□□□□□ -0.6
HOXC4-203ENST00000507650 IGLV2-18A0A075B6J9 118 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 LYRM9A8MSI8 78 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 H0YIZ8 118 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 NDUFB4O95168 129 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 DEFB130BP0DP73 79 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 DEFB130AP0DP74 79 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 CDKN1BP46527 198 aa11.31□□□□□ -0.6
HOXC4-203ENST00000507650 RPL29P47914 159 aaKnown RBP11.31□□□□□ -0.6
HOXC4-203ENST00000507650 GFI1BQ5VTD9 330 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms