RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15□□□□□ -0.01
USP53-203ENST00000507597 SORL1Q92673 2214 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 STAG3L2P0CL84 134 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 STAG3L3P0CL85 134 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 IGLC2P0DOY2 106 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 UBE2L3P68036 154 aaKnown RBP14.99□□□□□ -0.01
USP53-203ENST00000507597 FAM167A-AS1Q96KT0 104 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 LINC00052Q96N35 136 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 AAMDCQ9H7C9 122 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 TMEM167BQ9NRX6 74 aa14.99□□□□□ -0.01
USP53-203ENST00000507597 NBEAL1Q6ZS30 2694 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 TRBV19A0A075B6N1 114 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 ZNF688P0C7X2 276 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 DEFB131AP59861 70 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 FAM74A1Q5RGS3 127 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 LYPD1Q8N2G4 141 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 MAP6D1Q9H9H5 199 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 PRELID1Q9Y255 219 aa14.98□□□□□ -0.01
USP53-203ENST00000507597 PYYP10082 97 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 DEFA6Q01524 100 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 DEFB121Q5J5C9 76 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 PSMG4Q5JS54 123 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 Q8N1Y9 231 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 FAM213BQ8TBF2 198 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 BLNKQ8WV28 456 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 ZNF331Q9NQX6 463 aaPredicted RBP14.97□□□□□ -0.01
USP53-203ENST00000507597 UBQLN2Q9UHD9 624 aa14.97□□□□□ -0.01
USP53-203ENST00000507597 SOCS3O14543 225 aa14.96□□□□□ -0.01
USP53-203ENST00000507597 SULT1A2P50226 295 aa14.96□□□□□ -0.01
USP53-203ENST00000507597 ODF3L2Q3SX64 289 aa14.96□□□□□ -0.01
USP53-203ENST00000507597 EBLN2Q6P2I7 272 aa14.96□□□□□ -0.01
USP53-203ENST00000507597 MRAPQ8TCY5 172 aa14.96□□□□□ -0.01
USP53-203ENST00000507597 ZNF586Q9NXT0 402 aa14.96□□□□□ -0.01
USP53-203ENST00000507597 A8MZ25 164 aa14.95□□□□□ -0.02
USP53-203ENST00000507597 H3BQ15 152 aa14.95□□□□□ -0.02
USP53-203ENST00000507597 OR10J4P0C629 311 aa14.95□□□□□ -0.02
USP53-203ENST00000507597 ARL14EPLP0DKL9 152 aa14.95□□□□□ -0.02
USP53-203ENST00000507597 STHQ8IWL8 128 aa14.95□□□□□ -0.02
USP53-203ENST00000507597 IQCF2Q8IXL9 164 aa14.95□□□□□ -0.02
USP53-203ENST00000507597 FXYD5Q96DB9 178 aa14.95□□□□□ -0.02
USP53-203ENST00000507597 SAT2Q96F10 170 aaPredicted RBP14.95□□□□□ -0.02
USP53-203ENST00000507597 CMYA5Q8N3K9 4069 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 MAP1LC3B2A6NCE7 125 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 BOLA2-SMG1P6H3BVE0 249 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 HMGB3O15347 200 aaKnown RBP14.94□□□□□ -0.02
USP53-203ENST00000507597 H2AFB1P0C5Y9 115 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 PSG3Q16557 428 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 DEFB125Q8N687 156 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 ZNF738Q8NE65 137 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 MRPL53Q96EL3 112 aaKnown RBP14.94□□□□□ -0.02
USP53-203ENST00000507597 MAP1LC3BQ9GZQ8 125 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 SRD5A3Q9H8P0 318 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 C19orf73Q9NVV2 129 aa14.94□□□□□ -0.02
USP53-203ENST00000507597 HBE1P02100 147 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 PRB2P02812 416 aaPredicted RBP14.93□□□□□ -0.02
USP53-203ENST00000507597 IGHV4-30-4P0DP06 118 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 GCHFRP30047 84 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 CSN1S1P47710 185 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 PPT1P50897 306 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 FOXI2Q6ZQN5 318 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 FAM24BQ8N5W8 94 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 SFT2D1Q8WV19 159 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 MBD3L1Q8WWY6 194 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 C17orf77Q96MU5 243 aa14.93□□□□□ -0.02
USP53-203ENST00000507597 K7EIL1 84 aa14.92□□□□□ -0.02
USP53-203ENST00000507597 DUSP14O95147 198 aaKnown RBP14.92□□□□□ -0.02
USP53-203ENST00000507597 SNRPCP09234 159 aaKnown RBP14.92□□□□□ -0.02
USP53-203ENST00000507597 APRG1Q8IVJ8 170 aa14.92□□□□□ -0.02
USP53-203ENST00000507597 NKX6-2Q9C056 277 aaPredicted RBP14.92□□□□□ -0.02
USP53-203ENST00000507597 BOLA1Q9Y3E2 137 aa14.92□□□□□ -0.02
USP53-203ENST00000507597 LOC102724200A0A096LPH7 203 aaPredicted RBP14.91□□□□□ -0.02
USP53-203ENST00000507597 H3BTX0 84 aa14.91□□□□□ -0.02
USP53-203ENST00000507597 NUTF2P61970 127 aaKnown RBP14.91□□□□□ -0.02
USP53-203ENST00000507597 BLOC1S1P78537 153 aa14.91□□□□□ -0.02
USP53-203ENST00000507597 RXFP4Q8TDU9 374 aa14.91□□□□□ -0.02
USP53-203ENST00000507597 ZNF503Q96F45 646 aa14.91□□□□□ -0.02
USP53-203ENST00000507597 TRAV8-2A0A0B4J237 113 aa14.9□□□□□ -0.02
USP53-203ENST00000507597 APOC4P55056 127 aa14.9□□□□□ -0.02
USP53-203ENST00000507597 RANP62826 216 aaKnown RBP14.9□□□□□ -0.02
USP53-203ENST00000507597 ZNF726P1Q15940 193 aa14.9□□□□□ -0.02
USP53-203ENST00000507597 ARL6IP6Q8N6S5 226 aa14.9□□□□□ -0.02
USP53-203ENST00000507597 CMTM2Q8TAZ6 248 aa14.9□□□□□ -0.02
USP53-203ENST00000507597 SUN5Q8TC36 379 aa14.9□□□□□ -0.02
USP53-203ENST00000507597 ZNF705EA8MWA4 302 aaPredicted RBP14.89□□□□□ -0.03
USP53-203ENST00000507597 IFNA7P01567 189 aa14.89□□□□□ -0.03
USP53-203ENST00000507597 ACTL10Q5JWF8 245 aa14.89□□□□□ -0.03
USP53-203ENST00000507597 ALKAL2Q6UX46 152 aa14.89□□□□□ -0.03
USP53-203ENST00000507597 OR10J6PQ8NGY7 276 aa14.89□□□□□ -0.03
USP53-203ENST00000507597 RPUSD4Q96CM3 377 aaKnown RBP14.89□□□□□ -0.03
USP53-203ENST00000507597 Q9H3A6 140 aa14.89□□□□□ -0.03
USP53-203ENST00000507597 SAV1Q9H4B6 383 aaPredicted RBP14.89□□□□□ -0.03
USP53-203ENST00000507597 OTORQ9NRC9 128 aa14.89□□□□□ -0.03
USP53-203ENST00000507597 A0A1W2PRE2 83 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 SLC17A3O00476 420 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 NDUFB4O95168 129 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 HLA-DRB4P13762 266 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 FHITP49789 147 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 ICAM4Q14773 271 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 RNF182Q8N6D2 247 aa14.88□□□□□ -0.03
USP53-203ENST00000507597 ARL2-SNX15V9GYD0 113 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms