RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 C20orf144Q9BQM9 153 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 TXNDC17Q9BRA2 123 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 KLF12Q9Y4X4 402 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 TRAV18A0A075B6X5 111 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 A0A0J9YXV3 536 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 RNF222A6NCQ9 220 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 MEIS3P1A6NDR6 274 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 TMEM127O75204 238 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 PMP2P02689 132 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 MALP21145 153 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 PPT1P50897 306 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 AKR1C2P52895 323 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 OR10J3Q5JRS4 329 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 DHRS11Q6UWP2 260 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 LRRC20Q8TCA0 184 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 CYGBQ8WWM9 190 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 RRNAD1Q96FB5 475 aaKnown RBP4.64□□□□□ -1.67
VCAN-207ENST00000507162 C9orf16Q9BUW7 83 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 MND1Q9BWT6 205 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 SLC25A31Q9H0C2 315 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 MRPL16Q9NX20 251 aaKnown RBP4.64□□□□□ -1.67
VCAN-207ENST00000507162 PSORS1C1Q9UIG5 152 aa4.64□□□□□ -1.67
VCAN-207ENST00000507162 SMIM30A4D0T7 59 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 IGKV1-5P01602 117 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 SFTA3P0C7M3 94 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 FABP5Q01469 135 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 TRIM16LQ309B1 348 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 BSXQ3C1V8 233 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 C2orf83Q53S99 150 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 CCDC197Q8NCU1 140 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 OR1B1Q8NGR6 318 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 RAB24Q969Q5 203 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 RPUSD4Q96CM3 377 aaKnown RBP4.63□□□□□ -1.67
VCAN-207ENST00000507162 DIABLOQ9NR28 239 aa4.63□□□□□ -1.67
VCAN-207ENST00000507162 CEBPZOSA8MTT3 80 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 PTGES3LE9PB15 166 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 SPINK4O60575 86 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 PITX3O75364 302 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 ORM1P02763 201 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 FABP1P07148 127 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 RAB3BP20337 219 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 PSMA1P25786 263 aaKnown RBP4.62□□□□□ -1.67
VCAN-207ENST00000507162 HRH1P35367 487 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 SPCS3P61009 180 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 TRAM1Q15629 374 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 C10orf67Q8IYJ2 551 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 NHLRC2Q8NBF2 726 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 RNASE11Q8TAA1 199 aaKnown RBP4.62□□□□□ -1.67
VCAN-207ENST00000507162 PYGO2Q9BRQ0 406 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 IFT46Q9NQC8 304 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 TMEM56-RWDD3S4R434 201 aa4.62□□□□□ -1.67
VCAN-207ENST00000507162 IGKV1D-37A0A075B6S9 117 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 TRAV8-3A0A0A6YYJ7 113 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 LOC100131303A0A0U1RQF7 123 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 CRYM-AS1A6NIL9 109 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 GABARAPH6UMI1 98 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 SCGNO76038 276 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 GABARAPO95166 117 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 ORM2P19652 201 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 CXCL3P19876 107 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 MYL9P24844 172 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 ZNF846Q147U1 533 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 STEAP1BQ6NZ63 245 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 LPCAT3Q6P1A2 487 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 TEPPQ6URK8 271 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 ZBTB8BQ8NAP8 495 aaPredicted RBP4.61□□□□□ -1.67
VCAN-207ENST00000507162 C11orf72Q8NBR9 251 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 ZNF680Q8NEM1 530 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 ATP6V0E2Q8NHE4 81 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 VGLL1Q99990 258 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 FXYD6Q9H0Q3 95 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 MED4Q9NPJ6 270 aa4.61□□□□□ -1.67
VCAN-207ENST00000507162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.61□□□□□ -1.67
VCAN-207ENST00000507162 IGKV2D-24A0A075B6R9 120 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 IGKV1OR2-108A0A075B7D4 117 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 TRAV1-2A0A0B4J238 106 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 PANO1I0J062 215 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 CIB2O75838 187 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 ATG12O94817 140 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 TSPAN5P62079 268 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 LAGE3Q14657 143 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 FAM122CQ6P4D5 195 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 WDR73Q6P4I2 378 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 NOXA1Q86UR1 476 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 FAM219AQ8IW50 185 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 OR4D5Q8NGN0 318 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 OR5H2Q8NGV7 314 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 ZNF431Q8TF32 576 aaPredicted RBP4.6□□□□□ -1.67
VCAN-207ENST00000507162 TMEM170AQ8WVE7 144 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 ZNF479Q96JC4 524 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 GPR82Q96P67 336 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 ACOT13Q9NPJ3 140 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 LSM2Q9Y333 95 aaKnown RBP4.6□□□□□ -1.67
VCAN-207ENST00000507162 COX11Q9Y6N1 276 aa4.6□□□□□ -1.67
VCAN-207ENST00000507162 TRAV8-1A0A0A6YYK1 113 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 A0A0G2JRQ6 117 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 PGAM2P15259 253 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 TCL1AP56279 114 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 LAIR2Q6ISS4 152 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms