RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 TRAV30A0A087WSZ9 112 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV1-69DA0A0B4J2H0 117 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A0G2JRQ6 117 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 UBE2L5PA0A1B0GUS4 154 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A1B0GW64 132 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SMCO3A2RU48 225 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 PSMB11A5LHX3 300 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 NCBP2LA6PVI3 153 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 ODF3BA8MYP8 253 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 G3V4G9 280 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 RNASEK-C17orf49H0YIS7 233 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 H3BP45 60 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 I3L521 148 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 NPFFO15130 113 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 NDUFS6O75380 124 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 LY6HO94772 140 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM50AO95807 157 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 CA1P00915 261 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 CA2P00918 260 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 IGKV1D-33P01593 117 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 IGKV1-33P01594 117 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV1-69P01742 117 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 PRB1P04280 392 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 FBP1P09467 338 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SAA1P0DJI8 122 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 OR13C7P0DN81 318 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 DEFA4P12838 97 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 HIST1H1BP16401 226 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 M6PRP20645 277 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 FGF7P21781 194 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 ATP6V0CP27449 155 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 OPRK1P41145 380 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 VDAC2P45880 294 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 RPL27AP46776 148 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 REG1BP48304 166 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 PSMB3P49720 205 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 TAS2R45P59539 299 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 RHOBP62745 196 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 AKR1C1Q04828 323 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 LOXL1Q08397 574 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 EBI3Q14213 229 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 HES1Q14469 280 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 PSG5Q15238 335 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 MMDQ15546 238 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 TNXAQ16473 311 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM249Q2WGJ8 235 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 DEFB113Q30KQ7 82 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 BSXQ3C1V8 233 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 ACOT6Q3I5F7 207 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM144Q7Z5S9 345 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 VKORC1L1Q8N0U8 176 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SVBPQ8N300 66 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 OR10G4Q8NGN3 311 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 OR10G9Q8NGN4 311 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 OR1L4Q8NGR5 311 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 OR1P1Q8NH06 330 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 LYPD6BQ8NI32 183 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM213BQ8TBF2 198 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SFT2D1Q8WV19 159 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 MBD3L1Q8WWY6 194 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 NARS2Q96I59 477 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC35E1Q96K37 410 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 OR4C12Q96R67 309 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 PFDN5Q99471 154 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 P2RX4Q99571 388 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 RASL11BQ9BPW5 248 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 TXNDC17Q9BRA2 123 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 NPCDR1Q9BY65 106 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SMIM3Q9BZL3 60 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 NKX6-2Q9C056 277 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 EIF5A2Q9GZV4 153 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC35B3Q9H1N7 401 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 NARFLQ9H6Q4 476 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF430Q9H8G1 570 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 MANBALQ9NQG1 85 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SIRT7Q9NRC8 400 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC39A9Q9NUM3 307 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 METTL1Q9UBP6 276 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 VAX2Q9UIW0 290 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 HILPDAQ9Y5L2 63 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 DOPEY1Q5JWR5 2465 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 LRRK2Q5S007 2527 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 LOC400499M0QZD8 3231 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 MED12LQ86YW9 2145 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF407Q9C0G0 2248 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 ARHGAP21Q5T5U3 1957 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 MTORP42345 2549 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 ALPK2Q86TB3 2170 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TRAV3A0A0B4J244 114 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A0G2JLM5 398 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CENPVL3A0A0U1RRI6 287 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CTXND1A0A1B0GTU2 59 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM218A2RU14 115 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 RBFOX3A6NFN3 312 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 B4DEV8 164 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 F6UZH7 168 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 F8W036 122 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 FCN1O00602 326 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 AGPAT2O15120 278 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 PDE6DO43924 150 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms