RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 JMJD1CQ15652 2540 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 NAV3Q8IVL0 2385 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 ABCA13Q86UQ4 5058 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 KALRNO60229 2985 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 COL6A5A8TX70 2615 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 EPG5Q9HCE0 2579 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 TRAV3A0A0B4J244 114 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 TRDV1A0A1B0GX56 115 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 PRORSD1PA6NEY8 169 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 E7EQ34 232 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 TSTD3H0UI37 97 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 H3BQV1 296 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 HYPMO75409 117 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 GADD45GO95257 159 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 CXCL1P09341 107 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 NBEAP1P0C6P0 100 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 PRB4P10163 310 aaPredicted RBP0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 HLA-EP13747 358 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 RAB4BP61018 213 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 MYL5Q02045 173 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 RNASE10Q5GAN6 216 aaKnown RBP0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 SAMD13Q5VXD3 122 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 TOMM20LQ6UXN7 152 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 PRR15Q8IV56 129 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 LINC00301Q8NCQ3 95 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 PPTC7Q8NI37 304 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 GRPEL2Q8TAA5 225 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 TEX47Q8TBZ9 253 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 RMND5BQ96G75 393 aaPredicted RBP0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 CARD19Q96LW7 228 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 SLC25A21Q9BQT8 299 aaPredicted RBP0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 NPCDR1Q9BY65 106 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 C14orf132Q9NPU4 83 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 MED11Q9P086 117 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 LAMTOR3Q9UHA4 124 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 ZFP30Q9Y2G7 519 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 TNRC6AQ8NDV7 1962 aaKnown RBP0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 HECTD1Q9ULT8 2610 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 CEP152O94986 1710 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 COL24A1Q17RW2 1714 aa0.75□□□□□ -2.29
TOPBP1-204ENST00000505804 ARAP1Q96P48 1450 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 TRAPPC8Q9Y2L5 1435 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 LAMA4Q16363 1823 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 TRAV5A0A0B4J249 113 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 ODAMA1E959 279 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 A8MWV9 139 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 H7BYZ3 331 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 K7ERJ3 54 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 LYZL6O75951 148 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 PROSCO94903 275 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 UBL3O95164 117 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 FAM107AO95990 144 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 S100GP29377 79 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 TMBIM6P55061 237 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 ARPP19P56211 112 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 MSMO1Q15800 293 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 RTL8BQ17RB0 113 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 TMEM128Q5BJH2 165 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 C1orf140Q5VVS0 124 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 EIF5AL1Q6IS14 154 aaKnown RBP0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 PATE2Q6UY27 113 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 CROCCP2Q86T23 111 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 ANGPTL5Q86XS5 388 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 Q8IYB0 196 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 ZNF418Q8TF45 676 aaPredicted RBP0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 THEM6Q8WUY1 208 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 PYDC1Q8WXC3 89 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 BORCS8Q96FH0 119 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 EFCAB11Q9BUY7 163 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 CCDC32Q9BV29 185 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 OR2H1Q9GZK4 316 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 LRTM1Q9HBL6 345 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 POPDC3Q9HBV1 291 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 NUBP2Q9Y5Y2 271 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 USP54Q70EL1 1684 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 PIEZO1Q92508 2521 aa0.74□□□□□ -2.29
TOPBP1-204ENST00000505804 TCOF1Q13428 1488 aaKnown RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 FHAD1B1AJZ9 1412 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 SIP14410 1827 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 EPPK1P58107 5090 aaKnown RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 WDFY4Q6ZS81 3184 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 TRAV12-1A0A0B4J245 112 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 GABARAPH6UMI1 98 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 HIST1H2BKO60814 126 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 CST7O76096 145 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 HIST1H2BJP06899 126 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 BCL2P10415 239 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 RPL7P18124 248 aaKnown RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 RPL35P42766 123 aaKnown RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 POLR2HP52434 150 aaKnown RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 ROMO1P60602 79 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 KLRD1Q13241 179 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 DEFB113Q30KQ7 82 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 PHF5AQ7RTV0 110 aaKnown RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 Q8N814 137 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 SKA2Q8WVK7 121 aaPredicted RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 ISOC1Q96CN7 298 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 C6orf62Q9GZU0 229 aaPredicted RBP0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 OTORQ9NRC9 128 aa0.73□□□□□ -2.29
TOPBP1-204ENST00000505804 C19orf12Q9NSK7 152 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms