RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 SLC25A2Q9BXI2 301 aa6.14□□□□□ -1.43
LIMCH1-206ENST00000505705 A0A087X0K7 114 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 UMAD1C9J7I0 102 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 ISLRO14498 428 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 HIST1H1EP10412 219 aaKnown RBP6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 UBE2L3P68036 154 aaKnown RBP6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 PSG9Q00887 426 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 GUK1Q16774 197 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 C4orf48Q5BLP8 95 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 RPP25LQ8N5L8 163 aaKnown RBP6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 FAM24BQ8N5W8 94 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 FAM213BQ8TBF2 198 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 RNF141Q8WVD5 230 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 TMED6Q8WW62 240 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 RAB24Q969Q5 203 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 C17orf77Q96MU5 243 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 SLC50A1Q9BRV3 221 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 WFDC10AQ9H1F0 79 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 HRH4Q9H3N8 390 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 SRD5A3Q9H8P0 318 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 RPRMQ9NS64 109 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 TMEM14CQ9P0S9 112 aa6.13□□□□□ -1.43
LIMCH1-206ENST00000505705 CTXND1A0A1B0GTU2 59 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 BOLA2-SMG1P6H3BVE0 249 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 K7EIL1 84 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 MRPS12O15235 138 aaKnown RBP6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 CXorf1O96002 111 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 NBEAP1P0C6P0 100 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 STAG3L2P0CL84 134 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 STAG3L3P0CL85 134 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 IGLC2P0DOY2 106 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 IGHV4-30-4P0DP06 118 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 PSMB3P49720 205 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 ODF3L2Q3SX64 289 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 EBLN2Q6P2I7 272 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 STHQ8IWL8 128 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 Q8N1Y9 231 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF738Q8NE65 137 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 FAM167A-AS1Q96KT0 104 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 AAMDCQ9H7C9 122 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 PGPEP1Q9NXJ5 209 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF586Q9NXT0 402 aa6.12□□□□□ -1.43
LIMCH1-206ENST00000505705 TRBV19A0A075B6N1 114 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 H3BQ15 152 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 H2AFB1P0C5Y9 115 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 ARL14EPLP0DKL9 152 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 RAB5CP51148 216 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 FGF8P55075 233 aaPredicted RBP6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 RANP62826 216 aaKnown RBP6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF124Q15973 351 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 PSG3Q16557 428 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 ACTL10Q5JWF8 245 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 FAM74A1Q5RGS3 127 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 DPPA3Q6W0C5 159 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 RNF182Q8N6D2 247 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 SFT2D1Q8WV19 159 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF331Q9NQX6 463 aaPredicted RBP6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 PPP1R14DQ9NXH3 145 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 CLEC5AQ9NY25 188 aa6.11□□□□□ -1.43
LIMCH1-206ENST00000505705 VWFP04275 2813 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 LOC102724200A0A096LPH7 203 aaPredicted RBP6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 A0A1B0GV50 99 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 MAP1LC3B2A6NCE7 125 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 KNCNA6PVL3 124 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 TEX46H3BTG2 121 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 SLC17A3O00476 420 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 SOCS3O14543 225 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 RPL35AP18077 110 aaKnown RBP6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 HLA-DMBP28068 263 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 GCHFRP30047 84 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 CSN1S1P47710 185 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 FHITP49789 147 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 PDE6HQ13956 83 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 ALKAL2Q6UX46 152 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 SSX7Q7RTT5 188 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 OR4B1Q8NGF8 309 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 CMTM2Q8TAZ6 248 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 FXYD5Q96DB9 178 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 SAT2Q96F10 170 aaPredicted RBP6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF503Q96F45 646 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 PHYHIPLQ96FC7 376 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 C20orf173Q96LM9 149 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 MAP1LC3BQ9GZQ8 125 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 TMEM167BQ9NRX6 74 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
LIMCH1-206ENST00000505705 TRAV8-2A0A0B4J237 113 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 PGPA6NDG6 321 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF705FA8MVS1 300 aaPredicted RBP6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF705EA8MWA4 302 aaPredicted RBP6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 ZNF253O75346 499 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 IGKV3-20P01619 116 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 FRMD6-AS1P0C7T7 363 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 PRB4P10163 310 aaPredicted RBP6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 SULT1A2P50226 295 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 ICAM4Q14773 271 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms