RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ZGRF1Q86YA3 2104 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 TRPM1Q7Z4N2 1603 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 RER1O15258 196 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 DNAL4O96015 105 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 CDK6Q00534 326 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 KLRD1Q13241 179 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 RTL8BQ17RB0 113 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 C1orf140Q5VVS0 124 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 C4orf22Q6V702 233 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 Q8N814 137 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 BORCS8Q96FH0 119 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 CARD19Q96LW7 228 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 RTL8AQ9BWD3 113 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 CACYBPQ9HB71 228 aaKnown RBP0.94□□□□□ -2.26
CHD1-203ENST00000505657 ZFP30Q9Y2G7 519 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 RNF11Q9Y3C5 154 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 ASB4Q9Y574 426 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 TECPR2O15040 1411 aa0.94□□□□□ -2.26
CHD1-203ENST00000505657 TRAV10A0A0B4J240 114 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 A0A1B0GV72 72 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 HIST1H2BKO60814 126 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 IGLV1-51P01701 117 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 HIST1H2BJP06899 126 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 OR10J4P0C629 311 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 ZNF25P17030 456 aaPredicted RBP0.93□□□□□ -2.26
CHD1-203ENST00000505657 PLCXD2Q0VAA5 305 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 SPRNQ5BIV9 151 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 FAM74A1Q5RGS3 127 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 ANGPTL5Q86XS5 388 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 NUP35Q8NFH5 326 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 PATE1Q8WXA2 126 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 BORCS5Q969J3 196 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 RAB37Q96AX2 223 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 ODF3Q96PU9 254 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 TP53RKQ96S44 253 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 NINQ8N4C6 2090 aa0.93□□□□□ -2.26
CHD1-203ENST00000505657 PEAK1Q9H792 1746 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 FRMPD1Q5SYB0 1578 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 TNS3Q68CZ2 1445 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 LOC110117498A0A087WWA1 95 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 OR2T8A6NH00 312 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 C17orf112F2Z3M2 114 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 CCL16O15467 120 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 ERC2-IT1O76042 136 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 CST7O76096 145 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 IFNA4P05014 189 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 RAB5CP51148 216 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 DSCR4P56555 118 aaPredicted RBP0.92□□□□□ -2.26
CHD1-203ENST00000505657 HBBP68871 147 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 EIF3IQ13347 325 aaKnown RBP0.92□□□□□ -2.26
CHD1-203ENST00000505657 TMEM78Q5T7P6 136 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 C2orf82Q6UX34 121 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 TMEM14EPQ6UXP3 125 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 GRPEL2Q8TAA5 225 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 Q8TAT8 98 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 C4orf3Q8WVX3 66 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 MUCL1Q96DR8 90 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 OTORQ9NRC9 128 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 C22orf24Q9Y442 160 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 ANK1P16157 1881 aa0.92□□□□□ -2.26
CHD1-203ENST00000505657 ZCCHC11Q5TAX3 1644 aaKnown RBP0.92□□□□□ -2.26
CHD1-203ENST00000505657 PHRF1Q9P1Y6 1649 aaKnown RBP0.92□□□□□ -2.26
CHD1-203ENST00000505657 SPTBP11277 2137 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 TRDV1A0A1B0GX56 115 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 E7EUB6 86 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 GABARAPH6UMI1 98 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 IFNA21P01568 189 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 MT-ND6P03923 174 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 RPL35P42766 123 aaKnown RBP0.91□□□□□ -2.26
CHD1-203ENST00000505657 MPV17LQ2QL34 196 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 ZNF833PQ6ZTB9 187 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 SMIM15Q7Z3B0 74 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 GKN2Q86XP6 184 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 FAM19A2Q8N3H0 131 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 RMND5BQ96G75 393 aaPredicted RBP0.91□□□□□ -2.26
CHD1-203ENST00000505657 HYLS1Q96M11 299 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 LINC00052Q96N35 136 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 OR2H1Q9GZK4 316 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 MRPL40Q9NQ50 206 aaKnown RBP0.91□□□□□ -2.26
CHD1-203ENST00000505657 SMPXQ9UHP9 88 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 ATPIF1Q9UII2 106 aa0.91□□□□□ -2.26
CHD1-203ENST00000505657 MUC4Q99102 2169 aa0.9□□□□□ -2.26
CHD1-203ENST00000505657 TRBV6-4A0A1B0GX49 114 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 A0A1W2PRE2 83 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 hDV103S1A0JD37 113 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 H0YJX3 145 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 H3BQV1 296 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 H7BYZ3 331 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 CCL25O15444 150 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 KLF7O75840 302 aaPredicted RBP0.9□□□□□ -2.27
CHD1-203ENST00000505657 FABP2P12104 132 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 S100A11P31949 105 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 B2MP61769 119 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 GDF5OSQ5U4N7 250 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 PRR15Q8IV56 129 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 CCDC32Q9BV29 185 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 CENPHQ9H3R5 247 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 ORMDL1Q9P0S3 153 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 NUBP2Q9Y5Y2 271 aa0.9□□□□□ -2.27
CHD1-203ENST00000505657 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms