RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 FAM167A-AS1Q96KT0 104 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 C17orf77Q96MU5 243 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 ZNF331Q9NQX6 463 aaPredicted RBP9.24□□□□□ -0.93
SNCA-208ENST00000505199 TRBV19A0A075B6N1 114 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 ZNF688P0C7X2 276 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 NUTF2P61970 127 aaKnown RBP9.23□□□□□ -0.93
SNCA-208ENST00000505199 LGALSLQ3ZCW2 172 aaPredicted RBP9.23□□□□□ -0.93
SNCA-208ENST00000505199 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 MORN5Q5VZ52 161 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 MORN3Q6PF18 240 aaPredicted RBP9.23□□□□□ -0.93
SNCA-208ENST00000505199 DPPA3Q6W0C5 159 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 TMUB2Q71RG4 321 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 BAP18Q8IXM2 172 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 RPP25LQ8N5L8 163 aaKnown RBP9.23□□□□□ -0.93
SNCA-208ENST00000505199 ARL6IP6Q8N6S5 226 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 LRRC20Q8TCA0 184 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 SAT2Q96F10 170 aaPredicted RBP9.23□□□□□ -0.93
SNCA-208ENST00000505199 SLC25A2Q9BXI2 301 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 OR51M1Q9H341 326 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
SNCA-208ENST00000505199 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 STAG3L2P0CL84 134 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 STAG3L3P0CL85 134 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 CDC34P49427 236 aaPredicted RBP9.22□□□□□ -0.93
SNCA-208ENST00000505199 Q6ZWC4 215 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 SLC51BQ86UW2 128 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 STHQ8IWL8 128 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 FAM24BQ8N5W8 94 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 CITED4Q96RK1 184 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 PAXXQ9BUH6 204 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 ZNF471Q9BX82 626 aaPredicted RBP9.22□□□□□ -0.93
SNCA-208ENST00000505199 ACTR3CQ9C0K3 210 aaPredicted RBP9.22□□□□□ -0.93
SNCA-208ENST00000505199 SAV1Q9H4B6 383 aaPredicted RBP9.22□□□□□ -0.93
SNCA-208ENST00000505199 UBQLN2Q9UHD9 624 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 TP53TG1Q9Y2A0 90 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 SELENOKQ9Y6D0 94 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
SNCA-208ENST00000505199 A8MTW9 85 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 H3BQ15 152 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 OR7C2O60412 319 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 NBEAP1P0C6P0 100 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 RAB5CP51148 216 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 PSG3Q16557 428 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 AKR1C8PQ5T2L2 129 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 MIR17HGQ75NE6 70 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 TRPT1Q86TN4 253 aaKnown RBP9.21□□□□□ -0.94
SNCA-208ENST00000505199 FXYD5Q96DB9 178 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 C1QTNF4Q9BXJ3 329 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 SH3BGRL3Q9H299 93 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 AAMDCQ9H7C9 122 aa9.21□□□□□ -0.94
SNCA-208ENST00000505199 TRAV8-2A0A0B4J237 113 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 TRAV5A0A0B4J249 113 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 CTXND1A0A1B0GTU2 59 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 RBMY1BA6NDE4 496 aaKnown RBP9.2□□□□□ -0.94
SNCA-208ENST00000505199 RBMY1EA6NEQ0 496 aaKnown RBP9.2□□□□□ -0.94
SNCA-208ENST00000505199 H3BMM0 161 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 DUSP14O95147 198 aaKnown RBP9.2□□□□□ -0.94
SNCA-208ENST00000505199 CXorf1O96002 111 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 RBMY1DP0C7P1 496 aaKnown RBP9.2□□□□□ -0.94
SNCA-208ENST00000505199 RAB2AP61019 212 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 HAGHQ16775 308 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 APRG1Q8IVJ8 170 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 C9orf62Q8N4C0 152 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 SUN5Q8TC36 379 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 PHYHIPLQ96FC7 376 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 SPATA25Q9BR10 227 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 CSTL1Q9H114 145 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 ZMAT4Q9H898 229 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 ZNF586Q9NXT0 402 aa9.2□□□□□ -0.94
SNCA-208ENST00000505199 A0A0J9YX75 114 aa9.19□□□□□ -0.94
SNCA-208ENST00000505199 UBE2L3P68036 154 aaKnown RBP9.19□□□□□ -0.94
SNCA-208ENST00000505199 FAM74A1Q5RGS3 127 aa9.19□□□□□ -0.94
SNCA-208ENST00000505199 LINC00052Q96N35 136 aa9.19□□□□□ -0.94
SNCA-208ENST00000505199 NKX6-2Q9C056 277 aaPredicted RBP9.19□□□□□ -0.94
SNCA-208ENST00000505199 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
SNCA-208ENST00000505199 NDUFB4O95168 129 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 AMBPP02760 352 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 PYYP10082 97 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 FAM122CQ6P4D5 195 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 SBSPONQ8IVN8 264 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 ZNF503Q96F45 646 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 ARL2-SNX15V9GYD0 113 aa9.18□□□□□ -0.94
SNCA-208ENST00000505199 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
SNCA-208ENST00000505199 ARL14EPLP0DKL9 152 aa9.17□□□□□ -0.94
SNCA-208ENST00000505199 ZNF738Q8NE65 137 aa9.17□□□□□ -0.94
SNCA-208ENST00000505199 OR8A1Q8NGG7 326 aa9.17□□□□□ -0.94
SNCA-208ENST00000505199 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
SNCA-208ENST00000505199 SERTM2A0A1B0GWG4 89 aa9.16□□□□□ -0.94
SNCA-208ENST00000505199 A0A1W2PRE2 83 aa9.16□□□□□ -0.94
SNCA-208ENST00000505199 RBAKDNA6NC62 111 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms