RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 FRMPD1Q5SYB0 1578 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 ICE1Q9Y2F5 2266 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 ARHGEF11O15085 1522 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 TRAV12-1A0A0B4J245 112 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 TRBV27A0A0K0K1C4 114 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 CRPP02741 224 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 DBIP07108 87 aaKnown RBP2.24□□□□□ -2.05
HERC3-209ENST00000504994 CDK5R1Q15078 307 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 SMIM21Q3B7S5 101 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 FP248Q71RG6 208 aaPredicted RBP2.24□□□□□ -2.05
HERC3-209ENST00000504994 DIRC1Q969H9 104 aa2.24□□□□□ -2.05
HERC3-209ENST00000504994 FN1P02751 2386 aaKnown RBP2.23□□□□□ -2.05
HERC3-209ENST00000504994 MEIKINA0A087WXM9 373 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 DPM2O94777 84 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 MT-ND4LP03901 98 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 RPL22P35268 128 aaKnown RBP2.23□□□□□ -2.05
HERC3-209ENST00000504994 RAB5CP51148 216 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 FOXA3P55318 350 aaPredicted RBP2.23□□□□□ -2.05
HERC3-209ENST00000504994 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 COA5Q86WW8 74 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 SFT2D1Q8WV19 159 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 HYLS1Q96M11 299 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 PRELID3AQ96N28 172 aa2.23□□□□□ -2.05
HERC3-209ENST00000504994 ZFHX2Q9C0A1 2572 aaPredicted RBP2.22□□□□□ -2.05
HERC3-209ENST00000504994 BAZ2BQ9UIF8 2168 aaKnown RBP2.22□□□□□ -2.05
HERC3-209ENST00000504994 C17orf112F2Z3M2 114 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 M0R233 179 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 OR2H2O95918 312 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 CRYGSP22914 178 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 PDE6HQ13956 83 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 MORN2Q502X0 79 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 TMEM244Q5VVB8 128 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 MED12LQ86YW9 2145 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 TCTE3Q8IZS6 198 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 OR51A4Q8NGJ6 313 aa2.22□□□□□ -2.05
HERC3-209ENST00000504994 TRAV14DV4A0A0A6YYC5 116 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 OR2T8A6NH00 312 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 PAEPP09466 180 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 FREM1Q5H8C1 2179 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 CLECL1Q8IZS7 167 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 OR8J3Q8NGG0 315 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 NAT14Q8WUY8 206 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 RAB37Q96AX2 223 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 TCEAL4Q96EI5 215 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 MCEEQ96PE7 176 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 TMEM106BQ9NUM4 274 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 SCN3AQ9NY46 2000 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 KIAA1549Q9HCM3 1950 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 NISCHQ9Y2I1 1504 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 CEP192Q8TEP8 1941 aa2.21□□□□□ -2.06
HERC3-209ENST00000504994 COL5A3P25940 1745 aaPredicted RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 VWDEQ8N2E2 1590 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 FAM135BQ49AJ0 1406 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 E7EUB6 86 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 ZNF93P35789 620 aaPredicted RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 DSCR4P56555 118 aaPredicted RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 MRPS36P82909 103 aaKnown RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 CDK6Q00534 326 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 HIST1H1AQ02539 215 aaPredicted RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 TMEM14EPQ6UXP3 125 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 MORN4Q8NDC4 146 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 OR4B1Q8NGF8 309 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 OR5D14Q8NGL3 314 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 TMEM254Q8TBM7 123 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 ZCCHC13Q8WW36 166 aaKnown RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 CHCHD2Q9Y6H1 151 aaPredicted RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 MED23Q9ULK4 1368 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 PLXNA4Q9HCM2 1894 aa2.2□□□□□ -2.06
HERC3-209ENST00000504994 TCOF1Q13428 1488 aaKnown RBP2.2□□□□□ -2.06
HERC3-209ENST00000504994 TCRBV4S1A1TA0A5B7 111 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 LYRM1O43325 122 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 BRS3P32247 399 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 DEFB103AP81534 67 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 CCDC58Q4VC31 144 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 OR5A2Q8NGI9 324 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 CCL4L1Q8NHW4 92 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 GGACTQ9BVM4 153 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 OR5AC2Q9NZP5 309 aa2.19□□□□□ -2.06
HERC3-209ENST00000504994 MGAMO43451 1857 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 DLC1Q96QB1 1528 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 NDUFA2O43678 99 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 TCRAP04437 139 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 GPX1P07203 203 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 MPC1LP0DKB6 136 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 FABP4P15090 132 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 SRP9P49458 86 aaKnown RBP2.18□□□□□ -2.06
HERC3-209ENST00000504994 MAXP61244 160 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 ZNF625Q96I27 306 aaPredicted RBP2.18□□□□□ -2.06
HERC3-209ENST00000504994 FKBP11Q9NYL4 201 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 COPZ2Q9P299 210 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 MYLKQ15746 1914 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 CDK5RAP2Q96SN8 1893 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 MYOFQ9NZM1 2061 aa2.18□□□□□ -2.06
HERC3-209ENST00000504994 DSPPQ9NZW4 1301 aa2.17□□□□□ -2.06
HERC3-209ENST00000504994 A0A087WSZ3 146 aa2.17□□□□□ -2.06
HERC3-209ENST00000504994 TRBV6-5A0A0K0K1A5 114 aa2.17□□□□□ -2.06
HERC3-209ENST00000504994 SLC25A5P05141 298 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms