RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 MFFQ9GZY8 342 aa18.4■□□□□ 0.54
PVT1-201ENST00000504719 CLEC5AQ9NY25 188 aa18.4■□□□□ 0.54
PVT1-201ENST00000504719 HLA-DRB4P13762 266 aa18.39■□□□□ 0.53
PVT1-201ENST00000504719 Q5BKY6 102 aa18.39■□□□□ 0.53
PVT1-201ENST00000504719 HLA-DRB4X5D2U9 266 aa18.39■□□□□ 0.53
PVT1-201ENST00000504719 X6R8D5 127 aa18.39■□□□□ 0.53
PVT1-201ENST00000504719 MIFP14174 115 aa18.38■□□□□ 0.53
PVT1-201ENST00000504719 DEFB1P60022 68 aa18.38■□□□□ 0.53
PVT1-201ENST00000504719 NUTF2P61970 127 aaKnown RBP18.38■□□□□ 0.53
PVT1-201ENST00000504719 IGHV4-28A0A0C4DH34 117 aa18.37■□□□□ 0.53
PVT1-201ENST00000504719 MRPS12O15235 138 aaKnown RBP18.37■□□□□ 0.53
PVT1-201ENST00000504719 RBMY1A1P0DJD3 496 aaKnown RBP18.37■□□□□ 0.53
PVT1-201ENST00000504719 RBMY1CP0DJD4 496 aa18.37■□□□□ 0.53
PVT1-201ENST00000504719 RBMY1FQ15415 496 aaKnown RBP18.37■□□□□ 0.53
PVT1-201ENST00000504719 GDF5OSQ5U4N7 250 aa18.37■□□□□ 0.53
PVT1-201ENST00000504719 ZNF709Q8N972 641 aa18.37■□□□□ 0.53
PVT1-201ENST00000504719 C20orf173Q96LM9 149 aa18.37■□□□□ 0.53
PVT1-201ENST00000504719 A0A087X0K7 114 aa18.36■□□□□ 0.53
PVT1-201ENST00000504719 IGFL4Q6B9Z1 124 aa18.36■□□□□ 0.53
PVT1-201ENST00000504719 BPIFA4PQ86YQ2 179 aa18.36■□□□□ 0.53
PVT1-201ENST00000504719 C1QTNF4Q9BXJ3 329 aa18.36■□□□□ 0.53
PVT1-201ENST00000504719 SAV1Q9H4B6 383 aaPredicted RBP18.36■□□□□ 0.53
PVT1-201ENST00000504719 TRAV5A0A0B4J249 113 aa18.35■□□□□ 0.53
PVT1-201ENST00000504719 IFNA5P01569 189 aa18.35■□□□□ 0.53
PVT1-201ENST00000504719 GCSAMLQ5JQS6 135 aa18.35■□□□□ 0.53
PVT1-201ENST00000504719 FOXI2Q6ZQN5 318 aa18.35■□□□□ 0.53
PVT1-201ENST00000504719 WFDC1Q9HC57 220 aa18.35■□□□□ 0.53
PVT1-201ENST00000504719 RPRMQ9NS64 109 aa18.35■□□□□ 0.53
PVT1-201ENST00000504719 TRAV8-2A0A0B4J237 113 aa18.34■□□□□ 0.53
PVT1-201ENST00000504719 C17orf112F2Z3M2 114 aa18.34■□□□□ 0.53
PVT1-201ENST00000504719 LY6G6CO95867 125 aa18.34■□□□□ 0.53
PVT1-201ENST00000504719 SNRPCP09234 159 aaKnown RBP18.34■□□□□ 0.53
PVT1-201ENST00000504719 SCGB1C1Q8TD33 95 aa18.34■□□□□ 0.53
PVT1-201ENST00000504719 KCNIP2Q9NS61 270 aa18.34■□□□□ 0.53
PVT1-201ENST00000504719 XCL2Q9UBD3 114 aa18.34■□□□□ 0.53
PVT1-201ENST00000504719 RNF182Q8N6D2 247 aa18.33■□□□□ 0.52
PVT1-201ENST00000504719 OR2T35Q8NGX2 323 aa18.33■□□□□ 0.52
PVT1-201ENST00000504719 LRRC20Q8TCA0 184 aa18.33■□□□□ 0.52
PVT1-201ENST00000504719 AQP10Q96PS8 301 aa18.33■□□□□ 0.52
PVT1-201ENST00000504719 HRH4Q9H3N8 390 aa18.33■□□□□ 0.52
PVT1-201ENST00000504719 F6UB75 175 aa18.32■□□□□ 0.52
PVT1-201ENST00000504719 CLUHP3Q96NS8 147 aa18.32■□□□□ 0.52
PVT1-201ENST00000504719 IGKV3-20P01619 116 aa18.31■□□□□ 0.52
PVT1-201ENST00000504719 SPATA31B1PQ5VZV4 182 aa18.31■□□□□ 0.52
PVT1-201ENST00000504719 EBLN2Q6P2I7 272 aa18.31■□□□□ 0.52
PVT1-201ENST00000504719 FXYD6-FXYD2A0A087WZ82 144 aa18.3■□□□□ 0.52
PVT1-201ENST00000504719 H3BTX0 84 aa18.3■□□□□ 0.52
PVT1-201ENST00000504719 IGLC2P0DOY2 106 aa18.3■□□□□ 0.52
PVT1-201ENST00000504719 FAM78BQ5VT40 261 aa18.3■□□□□ 0.52
PVT1-201ENST00000504719 LCN15Q6UWW0 184 aa18.3■□□□□ 0.52
PVT1-201ENST00000504719 PARD6GQ9BYG4 376 aaPredicted RBP18.3■□□□□ 0.52
PVT1-201ENST00000504719 A0A0J9YX75 114 aa18.29■□□□□ 0.52
PVT1-201ENST00000504719 H3BQ15 152 aa18.29■□□□□ 0.52
PVT1-201ENST00000504719 CXCL2P19875 107 aa18.29■□□□□ 0.52
PVT1-201ENST00000504719 HLA-DMBP28068 263 aa18.29■□□□□ 0.52
PVT1-201ENST00000504719 FXYD7P58549 80 aa18.29■□□□□ 0.52
PVT1-201ENST00000504719 ZNF738Q8NE65 137 aa18.29■□□□□ 0.52
PVT1-201ENST00000504719 OR4B1Q8NGF8 309 aa18.29■□□□□ 0.52
PVT1-201ENST00000504719 FFAR4Q5NUL3 377 aa18.28■□□□□ 0.52
PVT1-201ENST00000504719 INO80EQ8NBZ0 244 aaPredicted RBP18.28■□□□□ 0.52
PVT1-201ENST00000504719 C2CD4CQ8TF44 421 aa18.28■□□□□ 0.52
PVT1-201ENST00000504719 G3V3Q6 166 aa18.27■□□□□ 0.52
PVT1-201ENST00000504719 PSG3Q16557 428 aa18.27■□□□□ 0.52
PVT1-201ENST00000504719 ZNF705AQ6ZN79 300 aaPredicted RBP18.27■□□□□ 0.52
PVT1-201ENST00000504719 MIR17HGQ75NE6 70 aa18.27■□□□□ 0.52
PVT1-201ENST00000504719 NEU1Q99519 415 aa18.27■□□□□ 0.52
PVT1-201ENST00000504719 SLC50A1Q9BRV3 221 aa18.27■□□□□ 0.52
PVT1-201ENST00000504719 ZNF331Q9NQX6 463 aaPredicted RBP18.27■□□□□ 0.52
PVT1-201ENST00000504719 TNFSF18Q9UNG2 199 aa18.27■□□□□ 0.52
PVT1-201ENST00000504719 RFNGQ9Y644 331 aa18.27■□□□□ 0.52
PVT1-201ENST00000504719 KMT2AQ03164 3969 aa18.27■□□□□ 0.51
PVT1-201ENST00000504719 EPPK1P58107 5090 aaKnown RBP18.26■□□□□ 0.51
PVT1-201ENST00000504719 C11orf94C9JXX5 98 aa18.26■□□□□ 0.51
PVT1-201ENST00000504719 SLC17A3O00476 420 aa18.26■□□□□ 0.51
PVT1-201ENST00000504719 PSG9Q00887 426 aa18.26■□□□□ 0.51
PVT1-201ENST00000504719 TMEM14CQ9P0S9 112 aa18.26■□□□□ 0.51
PVT1-201ENST00000504719 RNF222A6NCQ9 220 aa18.25■□□□□ 0.51
PVT1-201ENST00000504719 ZNF266Q14584 549 aa18.25■□□□□ 0.51
PVT1-201ENST00000504719 GUK1Q16774 197 aa18.25■□□□□ 0.51
PVT1-201ENST00000504719 SAT2Q96F10 170 aaPredicted RBP18.25■□□□□ 0.51
PVT1-201ENST00000504719 SLC25A2Q9BXI2 301 aa18.25■□□□□ 0.51
PVT1-201ENST00000504719 MRPL32Q9BYC8 188 aaKnown RBP18.25■□□□□ 0.51
PVT1-201ENST00000504719 SLC35B3Q9H1N7 401 aa18.25■□□□□ 0.51
PVT1-201ENST00000504719 ZNF586Q9NXT0 402 aa18.25■□□□□ 0.51
PVT1-201ENST00000504719 A8MTW9 85 aa18.24■□□□□ 0.51
PVT1-201ENST00000504719 ZNF705FA8MVS1 300 aaPredicted RBP18.24■□□□□ 0.51
PVT1-201ENST00000504719 SMLR1H3BR10 107 aa18.24■□□□□ 0.51
PVT1-201ENST00000504719 ZNF705DP0CH99 300 aaPredicted RBP18.24■□□□□ 0.51
PVT1-201ENST00000504719 ZNF705BP0CI00 300 aaPredicted RBP18.24■□□□□ 0.51
PVT1-201ENST00000504719 PYYP10082 97 aa18.24■□□□□ 0.51
PVT1-201ENST00000504719 LGALS9CQ6DKI2 356 aa18.24■□□□□ 0.51
PVT1-201ENST00000504719 FAM167A-AS1Q96KT0 104 aa18.24■□□□□ 0.51
PVT1-201ENST00000504719 CELA1Q9UNI1 258 aa18.24■□□□□ 0.51
PVT1-201ENST00000504719 FUT9Q9Y231 359 aa18.24■□□□□ 0.51
PVT1-201ENST00000504719 PRB4P10163 310 aaPredicted RBP18.23■□□□□ 0.51
PVT1-201ENST00000504719 Q6ZTC4 211 aa18.23■□□□□ 0.51
PVT1-201ENST00000504719 TRBV19A0A075B6N1 114 aa18.22■□□□□ 0.51
PVT1-201ENST00000504719 SMIM9A6NGZ8 99 aa18.22■□□□□ 0.51
PVT1-201ENST00000504719 DUSP14O95147 198 aaKnown RBP18.22■□□□□ 0.51
PVT1-201ENST00000504719 HIST1H1EP10412 219 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms