RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 SLC25A2Q9BXI2 301 aa13.48□□□□□ -0.25
DDR1-254ENST00000504679 OR51M1Q9H341 326 aa13.48□□□□□ -0.25
DDR1-254ENST00000504679 SNRPCP09234 159 aaKnown RBP13.47□□□□□ -0.25
DDR1-254ENST00000504679 C4BPBP20851 252 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 RAB2AP61019 212 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 FAM122CQ6P4D5 195 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 STHQ8IWL8 128 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 FAM167A-AS1Q96KT0 104 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 SLC50A1Q9BRV3 221 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 PAXXQ9BUH6 204 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 RPRMQ9NS64 109 aa13.47□□□□□ -0.25
DDR1-254ENST00000504679 H3BQ15 152 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 OR7C2O60412 319 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 SPP1P10451 314 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 TMEM41BQ5BJD5 291 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 AKR1C8PQ5T2L2 129 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 IGFL4Q6B9Z1 124 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 ASCL2Q99929 193 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.25
DDR1-254ENST00000504679 ZNF586Q9NXT0 402 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 CLEC5AQ9NY25 188 aa13.46□□□□□ -0.25
DDR1-254ENST00000504679 TRAV8-2A0A0B4J237 113 aa13.45□□□□□ -0.26
DDR1-254ENST00000504679 NBEAP1P0C6P0 100 aa13.45□□□□□ -0.26
DDR1-254ENST00000504679 PYYP10082 97 aa13.45□□□□□ -0.26
DDR1-254ENST00000504679 RPL35AP18077 110 aaKnown RBP13.45□□□□□ -0.26
DDR1-254ENST00000504679 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
DDR1-254ENST00000504679 SBSPONQ8IVN8 264 aa13.45□□□□□ -0.26
DDR1-254ENST00000504679 RPP25LQ8N5L8 163 aaKnown RBP13.45□□□□□ -0.26
DDR1-254ENST00000504679 RNF141Q8WVD5 230 aa13.45□□□□□ -0.26
DDR1-254ENST00000504679 SAT2Q96F10 170 aaPredicted RBP13.45□□□□□ -0.26
DDR1-254ENST00000504679 ZNF331Q9NQX6 463 aaPredicted RBP13.45□□□□□ -0.26
DDR1-254ENST00000504679 KNCNA6PVL3 124 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 H3BTX0 84 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 ZNF253O75346 499 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 SEC11BP0C7V7 166 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 NHLRC4P0CG21 123 aaPredicted RBP13.44□□□□□ -0.26
DDR1-254ENST00000504679 TPT1P13693 172 aaKnown RBP13.44□□□□□ -0.26
DDR1-254ENST00000504679 CDC34P49427 236 aaPredicted RBP13.44□□□□□ -0.26
DDR1-254ENST00000504679 APOC4P55056 127 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 PSG9Q00887 426 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 HAGHQ16775 308 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 BAP18Q8IXM2 172 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 BLNKQ8WV28 456 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 C20orf173Q96LM9 149 aa13.44□□□□□ -0.26
DDR1-254ENST00000504679 TRBV19A0A075B6N1 114 aa13.43□□□□□ -0.26
DDR1-254ENST00000504679 PDE6HQ13956 83 aa13.43□□□□□ -0.26
DDR1-254ENST00000504679 PSG3Q16557 428 aa13.43□□□□□ -0.26
DDR1-254ENST00000504679 RNF182Q8N6D2 247 aa13.43□□□□□ -0.26
DDR1-254ENST00000504679 RAB24Q969Q5 203 aa13.43□□□□□ -0.26
DDR1-254ENST00000504679 SAV1Q9H4B6 383 aaPredicted RBP13.43□□□□□ -0.26
DDR1-254ENST00000504679 KIR2DL5BA0A0G2JN68 375 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 KIR2DL5BA0A0G2JPC4 375 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 UBE2CO00762 179 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 OR10J4P0C629 311 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 FOXI2Q6ZQN5 318 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 KIR2DL5AQ8N109 375 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 ZNF738Q8NE65 137 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 KIR2DL5BQ8NHK3 375 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 STOML3Q8TAV4 291 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 FXYD5Q96DB9 178 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 CSTL1Q9H114 145 aa13.42□□□□□ -0.26
DDR1-254ENST00000504679 PRKDCP78527 4128 aaKnown RBP13.41□□□□□ -0.26
DDR1-254ENST00000504679 UMAD1C9J7I0 102 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 H3BMM0 161 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 HMGB3O15347 200 aaKnown RBP13.41□□□□□ -0.26
DDR1-254ENST00000504679 STAG3L2P0CL84 134 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 STAG3L3P0CL85 134 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 EIF5AL1Q6IS14 154 aaKnown RBP13.41□□□□□ -0.26
DDR1-254ENST00000504679 TRPT1Q86TN4 253 aaKnown RBP13.41□□□□□ -0.26
DDR1-254ENST00000504679 SLC51BQ86UW2 128 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 C9orf62Q8N4C0 152 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 ZNF503Q96F45 646 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 AAMDCQ9H7C9 122 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 ZMAT4Q9H898 229 aa13.41□□□□□ -0.26
DDR1-254ENST00000504679 SLC17A3O00476 420 aa13.4□□□□□ -0.26
DDR1-254ENST00000504679 EIF3GO75821 320 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDR1-254ENST00000504679 HLA-DRB4P13762 266 aa13.4□□□□□ -0.26
DDR1-254ENST00000504679 HLA-DMBP28068 263 aa13.4□□□□□ -0.26
DDR1-254ENST00000504679 UBE2L3P68036 154 aaKnown RBP13.4□□□□□ -0.26
DDR1-254ENST00000504679 MORN3Q6PF18 240 aaPredicted RBP13.4□□□□□ -0.26
DDR1-254ENST00000504679 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
DDR1-254ENST00000504679 HLA-DRB4X5D2U9 266 aa13.4□□□□□ -0.26
DDR1-254ENST00000504679 AGRNO00468 2067 aa13.4□□□□□ -0.27
DDR1-254ENST00000504679 A0A0J9YX75 114 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 CTXND1A0A1B0GTU2 59 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 DUSP14O95147 198 aaKnown RBP13.39□□□□□ -0.27
DDR1-254ENST00000504679 NDUFB4O95168 129 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 CXorf1O96002 111 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 DEFB1P60022 68 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 NUTF2P61970 127 aaKnown RBP13.39□□□□□ -0.27
DDR1-254ENST00000504679 GDF5OSQ5U4N7 250 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 LYPD1Q8N2G4 141 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 OR4B1Q8NGF8 309 aa13.39□□□□□ -0.27
DDR1-254ENST00000504679 RPUSD4Q96CM3 377 aaKnown RBP13.39□□□□□ -0.27
DDR1-254ENST00000504679 F6UB75 175 aa13.38□□□□□ -0.27
DDR1-254ENST00000504679 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
DDR1-254ENST00000504679 RANP62826 216 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms