RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 UBE2E1P51965 193 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 CLEC12BQ2HXU8 276 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 FAM103A1Q9BTL3 118 aaKnown RBP9.13□□□□□ -0.95
USP46-204ENST00000503060 IGLC1P0CG04 106 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 OR1N2Q8NGR9 330 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 NCBP2LA6PVI3 153 aaKnown RBP9.12□□□□□ -0.95
USP46-204ENST00000503060 K7EIM0 57 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 HYPMO75409 117 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 LINC01620Q4KN68 170 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 OR10G8Q8NGN5 311 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 FRZBQ92765 325 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 IMMP2LQ96T52 175 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 NPIPB6E9PJ23 425 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 NDUFA6P56556 154 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 CX3CL1P78423 397 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 CENPWQ5EE01 88 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 C11orf44Q8N8P7 122 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 AJUBAQ96IF1 538 aa9.12□□□□□ -0.95
USP46-204ENST00000503060 A0A087WX48 190 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 PSG1P11464 419 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 GNG4P50150 75 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 TIGITQ495A1 244 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 ARPC1AQ92747 370 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 GPR82Q96P67 336 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 CCL19Q99731 98 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 NPIPB5A8MRT5 1133 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 NDPQ00604 133 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 FOXL1Q12952 345 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 ASPHD1Q5U4P2 390 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 FA2HQ7L5A8 372 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 FBXL7Q9UJT9 491 aa9.11□□□□□ -0.95
USP46-204ENST00000503060 TINCRA0A1B0GVN0 87 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 IGKV1-17P01599 117 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 KLF17Q5JT82 389 aaPredicted RBP9.1□□□□□ -0.95
USP46-204ENST00000503060 ACTL10Q5JWF8 245 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 FAM120AOSQ5T036 256 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 ZNF329Q86UD4 541 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 SGMS2Q8NHU3 365 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 RASL11BQ9BPW5 248 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 HIGD1AQ9Y241 93 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 ESDP10768 282 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 SAA4P35542 130 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 LYZP61626 148 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 ZNF415Q09FC8 603 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 APRG1Q8IVJ8 170 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 BTF3L4Q96K17 158 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 IGF2BP2-AS1Q96M15 143 aa9.1□□□□□ -0.95
USP46-204ENST00000503060 IGLV11-55A0A075B6I3 123 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 GATA3P23771 443 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 TTC9CQ8N5M4 171 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 FAM168AQ92567 244 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 FANCD2OSQ96PS1 177 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 DUX3Q96PT4 197 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 C1RLQ9NZP8 487 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 COX11Q9Y6N1 276 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 AKAP6Q13023 2319 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 WNK2Q9Y3S1 2297 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 ACACBO00763 2458 aa9.09□□□□□ -0.95
USP46-204ENST00000503060 PRSS29PA6NIE9 313 aa9.09□□□□□ -0.96
USP46-204ENST00000503060 NPFFO15130 113 aa9.09□□□□□ -0.96
USP46-204ENST00000503060 GP9P14770 177 aa9.09□□□□□ -0.96
USP46-204ENST00000503060 MYCNOSP40205 109 aa9.09□□□□□ -0.96
USP46-204ENST00000503060 Q8N9W7 124 aa9.09□□□□□ -0.96
USP46-204ENST00000503060 MED13LQ71F56 2210 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 CFAP46Q8IYW2 2715 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 PEX7O00628 323 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 IGLV2-8P01709 118 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 RPEL1Q2QD12 228 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 C10orf105Q8TEF2 133 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 BLNKQ8WV28 456 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
USP46-204ENST00000503060 IL36BQ9NZH7 164 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 CDC42EP3Q9UKI2 254 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 IGSF10Q6WRI0 2623 aa9.08□□□□□ -0.96
USP46-204ENST00000503060 IGHV7-81A0A0B4J1V7 117 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 IGHV4-61A0A0C4DH41 118 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 GCGP01275 180 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 PAX8Q06710 450 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 C1orf194Q5T5A4 169 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 OR13C6PQ8NH95 151 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 DNAJC30Q96LL9 226 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 SLC25A39Q9BZJ4 359 aaPredicted RBP9.07□□□□□ -0.96
USP46-204ENST00000503060 MRPL27Q9P0M9 148 aaKnown RBP9.07□□□□□ -0.96
USP46-204ENST00000503060 LOC102724200A0A096LPH7 203 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms