RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 APOBP04114 4563 aaKnown RBP4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 IL5P05113 134 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 HTN3P15516 51 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 AZU1P20160 251 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 DLK1P80370 383 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 AKR1C1Q04828 323 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 CNPY1Q3B7I2 92 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 TEPPQ6URK8 271 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 TMEM14EPQ6UXP3 125 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 TOMM5Q8N4H5 51 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 MAPKAPK5-AS1Q8N8E1 139 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 RXFP4Q8TDU9 374 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 RNF141Q8WVD5 230 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 LINC01587Q99440 93 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 LINC00467Q9BRT7 94 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF331Q9NQX6 463 aaPredicted RBP4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 PRR13Q9NZ81 148 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 NAP1L6A6NFF2 107 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 F5H768 121 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF701M0R085 212 aaPredicted RBP4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 WRBO00258 174 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 TSC22D2O75157 780 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF253O75346 499 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 LINC00869P0C866 280 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 DEFB130BP0DP73 79 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 DEFB130AP0DP74 79 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 IAPPP10997 89 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 M6PRP20645 277 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 VAMP1P23763 118 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 GATA2P23769 480 aaPredicted RBP4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 DAZ2Q13117 558 aaKnown RBP4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 PPP1R1AQ13522 171 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 GUK1Q16774 197 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 C4orf48Q5BLP8 95 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 SPANXN5Q5MJ07 72 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 SSX7Q7RTT5 188 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 TMED4Q7Z7H5 227 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF546Q86UE3 836 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 BPIFA4PQ86YQ2 179 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 BAP18Q8IXM2 172 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 RNF182Q8N6D2 247 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF738Q8NE65 137 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 PYGO2Q9BRQ0 406 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 MRPS16Q9Y3D3 137 aaKnown RBP4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 PXMP4Q9Y6I8 212 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 V9GYH0 126 aa4.24□□□□□ -1.73
LSM3P4-201ENST00000502948 TRAV12-2A0A075B6T6 113 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 H3BMQ9 156 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 NUDT3O95989 172 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 NMBP08949 121 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 IGLC2P0DOY2 106 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 HIST1H1AQ02539 215 aaPredicted RBP4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 CLINT1Q14677 625 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 CDPF1Q6NVV7 123 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 PATE2Q6UY27 113 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 CCDC28AQ8IWP9 274 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 OR10P1Q8NGE3 313 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 MCFD2Q8NI22 146 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 CHAC2Q8WUX2 184 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 RPUSD4Q96CM3 377 aaKnown RBP4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 GNPNAT1Q96EK6 184 aaPredicted RBP4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 MRPL53Q96EL3 112 aaKnown RBP4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 SAT2Q96F10 170 aaPredicted RBP4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 ARV1Q9H2C2 271 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 PPP1R14DQ9NXH3 145 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 PSENENQ9NZ42 101 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 DNAH5Q8TE73 4624 aa4.23□□□□□ -1.73
LSM3P4-201ENST00000502948 TRAV26-1A0A087WT03 109 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 C9orf170A2RU37 121 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 SNURFLB1AK76 121 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 NPIPB6E9PJ23 425 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 NOL3O60936 208 aaKnown RBP4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 NDUFB6O95139 128 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 RLN2P04090 185 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 PRM2P04554 102 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 HOXB5P09067 269 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 OR5G3P0C626 314 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 RHOBP62745 196 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 FCN2Q15485 313 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 ESRGQ1W209 222 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 ANXA2RQ3ZCQ2 193 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 LINC00305Q7Z4B0 112 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF680Q8NEM1 530 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 LRRC20Q8TCA0 184 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 UHRF2Q96PU4 802 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 ARL6Q9H0F7 186 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 NOP10Q9NPE3 64 aaKnown RBP4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 PGPEP1Q9NXJ5 209 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 MGAT4CQ9UBM8 478 aa4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 PAIP2BQ9ULR5 123 aaKnown RBP4.22□□□□□ -1.73
LSM3P4-201ENST00000502948 TRBV7-9A0A0J9YWB2 115 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 KLLNB2CW77 178 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 H3BP45 60 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 GOSR2O14653 212 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 AGPAT2O15120 278 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 SLC25A5P05141 298 aaKnown RBP4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 OR4E1P0C645 316 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 ANXA7P20073 488 aaKnown RBP4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 HOXA5P20719 270 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms