RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 CHEK1O14757 476 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 NDUFB4O95168 129 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 SLURP1P55000 103 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 RANP62826 216 aaKnown RBP10.28□□□□□ -0.76
SGCA-203ENST00000502555 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
SGCA-203ENST00000502555 SIGLEC15Q6ZMC9 328 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 Q9H3A6 140 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 PEMTQ9UBM1 199 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 SMAD5-AS1Q9Y6J3 95 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 IGHV3OR16-13A0A075B7E8 117 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 IGHV3-74A0A0B4J1X5 117 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 ADARB2-AS1A8MUL3 147 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 M0QZ24 198 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 SNRPCP09234 159 aaKnown RBP10.27□□□□□ -0.77
SGCA-203ENST00000502555 CEBPGP53567 150 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 PSG9Q00887 426 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 FAM90A2PQ658T7 463 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 C5orf17Q8NAS9 161 aa10.27□□□□□ -0.77
SGCA-203ENST00000502555 RPUSD4Q96CM3 377 aaKnown RBP10.27□□□□□ -0.77
SGCA-203ENST00000502555 SCO2A0A1W2PP80 73 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 PGPA6NDG6 321 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 H3BTX0 84 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 KRTAP10-3P60369 221 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 FAM74A3Q4VXF1 159 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 C17orf77Q96MU5 243 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 SLC50A1Q9BRV3 221 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 AAMDCQ9H7C9 122 aa10.26□□□□□ -0.77
SGCA-203ENST00000502555 SLC17A3O00476 420 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 SLC25A5P05141 298 aaKnown RBP10.25□□□□□ -0.77
SGCA-203ENST00000502555 CBLN1P23435 193 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 AWAT1Q58HT5 328 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 CMTM2Q8TAZ6 248 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 DLX4Q92988 240 aaPredicted RBP10.25□□□□□ -0.77
SGCA-203ENST00000502555 DUX3Q96PT4 197 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 PARLQ9H300 379 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 ZNF331Q9NQX6 463 aaPredicted RBP10.25□□□□□ -0.77
SGCA-203ENST00000502555 CLEC5AQ9NY25 188 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 EPDR1Q9UM22 224 aa10.25□□□□□ -0.77
SGCA-203ENST00000502555 NF1P21359 2839 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 PEX7O00628 323 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 APOC3P02656 99 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 EXOC3-AS1Q8N2X6 119 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 SVBPQ8N300 66 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 C2CD4CQ8TF44 421 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 SMIM7Q9BQ49 75 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 NIPSNAP3BQ9BS92 247 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 ATG101Q9BSB4 218 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 NRN1Q9NPD7 142 aa10.24□□□□□ -0.77
SGCA-203ENST00000502555 JMJD1CQ15652 2540 aa10.23□□□□□ -0.77
SGCA-203ENST00000502555 SETD2Q9BYW2 2564 aaPredicted RBP10.23□□□□□ -0.77
SGCA-203ENST00000502555 FOLR2P14207 255 aa10.23□□□□□ -0.77
SGCA-203ENST00000502555 AKR1C3P42330 323 aa10.23□□□□□ -0.77
SGCA-203ENST00000502555 NSUN5P1Q3KNT7 163 aa10.23□□□□□ -0.77
SGCA-203ENST00000502555 TCF24Q7RTU0 167 aa10.23□□□□□ -0.77
SGCA-203ENST00000502555 PRELID1Q9Y255 219 aa10.23□□□□□ -0.77
SGCA-203ENST00000502555 SERTM2A0A1B0GWG4 89 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 TCRAP04437 139 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 S100A9P06702 114 aaKnown RBP10.22□□□□□ -0.77
SGCA-203ENST00000502555 CSN3P07498 182 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 EDN2P20800 178 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 CSN1S1P47710 185 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 CNN1P51911 297 aaKnown RBP10.22□□□□□ -0.77
SGCA-203ENST00000502555 PNRC1Q12796 327 aaPredicted RBP10.22□□□□□ -0.77
SGCA-203ENST00000502555 ZNF674Q2M3X9 581 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 KRTAP24-1Q3LI83 254 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
SGCA-203ENST00000502555 CITED1Q99966 193 aa10.22□□□□□ -0.77
SGCA-203ENST00000502555 C9JCJ5 164 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 SOCS3O14543 225 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 OVOL1O14753 267 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 RPL35P42766 123 aaKnown RBP10.21□□□□□ -0.78
SGCA-203ENST00000502555 TAS2R60P59551 318 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 RPL11P62913 178 aaKnown RBP10.21□□□□□ -0.78
SGCA-203ENST00000502555 GNG5P63218 68 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 GUCA2BQ16661 112 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 ADAMTSL5Q6ZMM2 481 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 DERL1Q9BUN8 251 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 SIGLEC8Q9NYZ4 499 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 NAT8Q9UHE5 227 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 KLF12Q9Y4X4 402 aa10.21□□□□□ -0.78
SGCA-203ENST00000502555 TEP1Q99973 2627 aaKnown RBP10.21□□□□□ -0.78
SGCA-203ENST00000502555 TRAV8-2A0A0B4J237 113 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 K7EQM0 130 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 ISLRO14498 428 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 SNAPINO95295 136 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 TVP23CQ96ET8 276 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 FMC1Q96HJ9 113 aa10.2□□□□□ -0.78
SGCA-203ENST00000502555 C16orf92Q96LL3 132 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms