RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DCANP1Q8TF63 244 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 ZNF503Q96F45 646 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 C16orf92Q96LL3 132 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 UBQLN2Q9UHD9 624 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 AGRNO00468 2067 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 TRAV2A0A0B4J234 112 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 ZNF705EA8MWA4 302 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-227ENST00000498056 H3BQ15 152 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 K7EQG2 157 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 SLC17A3O00476 420 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 CXorf1O96002 111 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
CPNE1-227ENST00000498056 GCHFRP30047 84 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 KRTAP10-11P60412 298 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 BEAN1Q3B7T3 259 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 SAMD13Q5VXD3 122 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 RNF141Q8WVD5 230 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 FXYD5Q96DB9 178 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 ZNF586Q9NXT0 402 aa10.16□□□□□ -0.78
CPNE1-227ENST00000498056 CD7P09564 240 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 PSMB3P49720 205 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 SNRPD3P62318 126 aaKnown RBP10.15□□□□□ -0.78
CPNE1-227ENST00000498056 GUK1Q16774 197 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 TEX261Q6UWH6 196 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 RNF182Q8N6D2 247 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 C17orf77Q96MU5 243 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 SLC50A1Q9BRV3 221 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 HRH4Q9H3N8 390 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 MAP6D1Q9H9H5 199 aa10.15□□□□□ -0.78
CPNE1-227ENST00000498056 ZMAT5Q9UDW3 170 aaKnown RBP10.15□□□□□ -0.78
CPNE1-227ENST00000498056 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 ISLRO14498 428 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 SOCS3O14543 225 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 H2AFB1P0C5Y9 115 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 ID1P41134 155 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 IGFL4Q6B9Z1 124 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 LINC00052Q96N35 136 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 WFDC10AQ9H1F0 79 aa10.14□□□□□ -0.79
CPNE1-227ENST00000498056 NOTCH1P46531 2555 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 OR11H12B2RN74 326 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 IFNA7P01567 189 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 PRB2P02812 416 aaPredicted RBP10.13□□□□□ -0.79
CPNE1-227ENST00000498056 NBEAP1P0C6P0 100 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 HLA-DMBP28068 263 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 PDE6HQ13956 83 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 ZNF738Q8NE65 137 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 AAMDCQ9H7C9 122 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 ZNF331Q9NQX6 463 aaPredicted RBP10.13□□□□□ -0.79
CPNE1-227ENST00000498056 TMEM167BQ9NRX6 74 aa10.13□□□□□ -0.79
CPNE1-227ENST00000498056 DNAH3Q8TD57 4116 aa10.12□□□□□ -0.79
CPNE1-227ENST00000498056 TEX46H3BTG2 121 aa10.12□□□□□ -0.79
CPNE1-227ENST00000498056 ZNF253O75346 499 aa10.12□□□□□ -0.79
CPNE1-227ENST00000498056 DEFB131AP59861 70 aa10.12□□□□□ -0.79
CPNE1-227ENST00000498056 UBE2G2P60604 165 aa10.12□□□□□ -0.79
CPNE1-227ENST00000498056 KPRPQ5T749 579 aaPredicted RBP10.12□□□□□ -0.79
CPNE1-227ENST00000498056 ZNF680Q8NEM1 530 aa10.12□□□□□ -0.79
CPNE1-227ENST00000498056 TMPRSS5Q9H3S3 457 aa10.12□□□□□ -0.79
CPNE1-227ENST00000498056 AURKAIP1Q9NWT8 199 aaPredicted RBP10.12□□□□□ -0.79
CPNE1-227ENST00000498056 TRAV8-2A0A0B4J237 113 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 NDUFB4O95168 129 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 HBE1P02100 147 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 PRB4P10163 310 aaPredicted RBP10.11□□□□□ -0.79
CPNE1-227ENST00000498056 RANP62826 216 aaKnown RBP10.11□□□□□ -0.79
CPNE1-227ENST00000498056 PSG9Q00887 426 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 ZNF124Q15973 351 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 EXOC3-AS1Q8N2X6 119 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 PCNPQ8WW12 178 aaKnown RBP10.11□□□□□ -0.79
CPNE1-227ENST00000498056 MBD3L1Q8WWY6 194 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 SAT2Q96F10 170 aaPredicted RBP10.11□□□□□ -0.79
CPNE1-227ENST00000498056 C20orf173Q96LM9 149 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 Q9H3A6 140 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
CPNE1-227ENST00000498056 DEFB1P60022 68 aa10.1□□□□□ -0.79
CPNE1-227ENST00000498056 BLOC1S1P78537 153 aa10.1□□□□□ -0.79
CPNE1-227ENST00000498056 ICAM4Q14773 271 aa10.1□□□□□ -0.79
CPNE1-227ENST00000498056 DEFB125Q8N687 156 aa10.1□□□□□ -0.79
CPNE1-227ENST00000498056 NBEAL1Q6ZS30 2694 aa10.09□□□□□ -0.79
CPNE1-227ENST00000498056 M0R3E3 92 aa10.09□□□□□ -0.79
CPNE1-227ENST00000498056 PSG3Q16557 428 aa10.09□□□□□ -0.79
CPNE1-227ENST00000498056 SRD5A3Q9H8P0 318 aa10.09□□□□□ -0.79
CPNE1-227ENST00000498056 OTORQ9NRC9 128 aa10.09□□□□□ -0.79
CPNE1-227ENST00000498056 GNG13Q9P2W3 67 aa10.09□□□□□ -0.79
CPNE1-227ENST00000498056 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
CPNE1-227ENST00000498056 GGTLC3B5MD39 225 aa10.08□□□□□ -0.8
CPNE1-227ENST00000498056 F6UB75 175 aa10.08□□□□□ -0.8
CPNE1-227ENST00000498056 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
CPNE1-227ENST00000498056 ACTL10Q5JWF8 245 aa10.08□□□□□ -0.8
CPNE1-227ENST00000498056 RPUSD4Q96CM3 377 aaKnown RBP10.08□□□□□ -0.8
CPNE1-227ENST00000498056 C19orf73Q9NVV2 129 aa10.08□□□□□ -0.8
CPNE1-227ENST00000498056 YTHDF2Q9Y5A9 579 aaKnown RBP10.08□□□□□ -0.8
CPNE1-227ENST00000498056 TRAV1-1A0A0B4J248 108 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 ZNF705FA8MVS1 300 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-227ENST00000498056 IFNA1P01562 189 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 SLC25A5P05141 298 aaKnown RBP10.07□□□□□ -0.8
CPNE1-227ENST00000498056 PPT1P50897 306 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms