RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 FAM209BQ5JX69 171 aa13.66□□□□□ -0.22
CHRNA4-206ENST00000498043 ANAPC16Q96DE5 110 aa13.66□□□□□ -0.22
CHRNA4-206ENST00000498043 ZNF320A2RRD8 509 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 GGCTO75223 188 aaKnown RBP13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 IGLV2-8P01709 118 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 MGST1P10620 155 aaKnown RBP13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 TAS2R60P59551 318 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 LYPD1Q8N2G4 141 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 TGIF2-C20orf24A0A0A6YYL0 155 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 M0R3E3 92 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 ELANEP08246 267 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 GOLT1AQ6ZVE7 132 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 AAMDCQ9H7C9 122 aa13.65□□□□□ -0.22
CHRNA4-206ENST00000498043 CXCL1P09341 107 aa13.64□□□□□ -0.23
CHRNA4-206ENST00000498043 CD99P14209 185 aa13.64□□□□□ -0.23
CHRNA4-206ENST00000498043 GALR1P47211 349 aa13.64□□□□□ -0.23
CHRNA4-206ENST00000498043 TMEM190Q8WZ59 177 aa13.64□□□□□ -0.23
CHRNA4-206ENST00000498043 U3KQE9 123 aa13.64□□□□□ -0.23
CHRNA4-206ENST00000498043 TRAV8-1A0A0A6YYK1 113 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 ZNF785A8K8V0 405 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 LY6G6DO95868 133 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 SRD5A1P18405 259 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 RAB5AP20339 215 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 Q6ZSV7 163 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 BAGE2Q86Y30 109 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 MYOZ3Q8TDC0 251 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 PSG9Q00887 426 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 SCGB2A2Q13296 93 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 C1orf194Q5T5A4 169 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 IGFL4Q6B9Z1 124 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 FMC1Q96HJ9 113 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 GPR82Q96P67 336 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 TMEM160Q9NX00 188 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 KLF12Q9Y4X4 402 aa13.63□□□□□ -0.23
CHRNA4-206ENST00000498043 CRYBA1P05813 215 aa13.62□□□□□ -0.23
CHRNA4-206ENST00000498043 ERVFC1-1P60608 527 aa13.62□□□□□ -0.23
CHRNA4-206ENST00000498043 KLHDC1Q8N7A1 406 aa13.62□□□□□ -0.23
CHRNA4-206ENST00000498043 OR10G8Q8NGN5 311 aa13.62□□□□□ -0.23
CHRNA4-206ENST00000498043 A0A087X0K7 114 aa13.62□□□□□ -0.23
CHRNA4-206ENST00000498043 PPP1R2P9O14990 202 aa13.62□□□□□ -0.23
CHRNA4-206ENST00000498043 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
CHRNA4-206ENST00000498043 MTORP42345 2549 aa13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 GCGP01275 180 aa13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 LGALS1P09382 135 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 HLA-DMBP28068 263 aa13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 Q86TA4 180 aa13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 RNF152Q8N8N0 203 aa13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 ZNF331Q9NQX6 463 aaPredicted RBP13.61□□□□□ -0.23
CHRNA4-206ENST00000498043 S100PP25815 95 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 RPEL1Q2QD12 228 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 TM4SF20Q53R12 229 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 PRR27Q6MZM9 219 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 C16orf54Q6UWD8 224 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 Q71RC1 249 aaPredicted RBP13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 GLMPQ8WWB7 406 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 NF1P21359 2839 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 DIRC3C9JPN6 131 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 ZNF253O75346 499 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 LTAP01374 205 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 IGLV2-11P01706 119 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 UBE2E2Q96LR5 201 aa13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 DAZ1Q9NQZ3 744 aaKnown RBP13.6□□□□□ -0.23
CHRNA4-206ENST00000498043 A0A1W2PPQ1 181 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 S100A9P06702 114 aaKnown RBP13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 PFN1P07737 140 aaKnown RBP13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 EDN2P20800 178 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 PRNTQ86SH4 94 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 K7EQM0 130 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 CSN1S1P47710 185 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 FAM106AQ4KMX7 169 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 KHDC1LQ5JSQ8 128 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 IBA57Q5T440 356 aaKnown RBP13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 C18orf65Q6ZTR6 163 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 RNF182Q8N6D2 247 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 TMEM75Q8N9X5 138 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 ZNF418Q8TF45 676 aaPredicted RBP13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 ASCL2Q99929 193 aa13.59□□□□□ -0.23
CHRNA4-206ENST00000498043 IGHV4OR15-8A0A075B7B6 117 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 A0A087WW49 117 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 FOLR2P14207 255 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 RPS10P46783 165 aaKnown RBP13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 KCNIP4Q6PIL6 250 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 C8orf86Q6ZUL3 223 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 C1QL4Q86Z23 238 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 FAM210BQ96KR6 192 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 MLXQ9UH92 298 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 SELENOKQ9Y6D0 94 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 V9GYV3 84 aa13.58□□□□□ -0.24
CHRNA4-206ENST00000498043 IGKV2-40A0A087WW87 121 aaPredicted RBP13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 ZNF705FA8MVS1 300 aaPredicted RBP13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 IGKV2D-40P01614 121 aaPredicted RBP13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 FAM3BP58499 235 aaPredicted RBP13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 HIST2H2BDQ6DRA6 164 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 GPHB5Q86YW7 130 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 ZFP82Q8N141 532 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 GRAMD2BQ96HH9 432 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms