RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 GGTLC3B5MD39 225 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 C19orf84I3L1E1 186 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 ZNF324O75467 553 aaPredicted RBP9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 WT1-ASQ06250 92 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 TIGITQ495A1 244 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 MUC21Q5SSG8 566 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 THAP8Q8NA92 274 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 SPANXA1Q9NS26 97 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 INSIG2Q9Y5U4 225 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 TRAV9-1A0A075B6T8 112 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 IGKV1OR2-108A0A075B7D4 117 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 NUDT3O95989 172 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 RITA1Q96K30 269 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 PPDPFQ9H3Y8 114 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 SIGLEC9Q9Y336 463 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 MAP1BP46821 2468 aaKnown RBP9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 TRAV5A0A0B4J249 113 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 IBA57Q5T440 356 aaKnown RBP9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 CFHR4Q92496 578 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 RPEQ96AT9 228 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
SNRNP200-208ENST00000497539 E7EUB6 86 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 ENSAO43768 121 aaKnown RBP9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 LY6HO94772 140 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 IGLV2-8P01709 118 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 APCSP02743 223 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 AREGP15514 252 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 Q56UQ5 140 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 MORN5Q5VZ52 161 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 NPBQ8NG41 125 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 GRAMD2BQ96HH9 432 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 SGK494Q96LW2 274 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 DPM3Q9P2X0 92 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 IGHV3-48P01763 117 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 HTR1DP28221 377 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 TNXAQ16473 311 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 MINOS1Q5TGZ0 78 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 BORCS7Q96B45 105 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 MINOS1-NBL1R4GNA1 71 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 CHD8Q9HCK8 2581 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 TRBV9A0A0B4J1U6 114 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 NDUFA3O95167 84 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 AMY1AP04745 511 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 COX7A1P24310 79 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 OR10J3Q5JRS4 329 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 OR2K2Q8NGT1 345 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 SIRPDQ9H106 197 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 UBTD1Q9HAC8 227 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 ZNF355PQ9NSJ1 428 aa9.18□□□□□ -0.94
SNRNP200-208ENST00000497539 CD24P25063 80 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 RPL27AP46776 148 aaKnown RBP9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 FA2HQ7L5A8 372 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 PIMREGQ9BSJ6 248 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 TECRQ9NZ01 308 aaKnown RBP9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 C7orf71A4D174 169 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 TEX22C9J3V5 150 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 CAMPP49913 170 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 MFAP2P55001 183 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 RPL24P83731 157 aaKnown RBP9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 LCNL1Q6ZST4 164 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 C18orf32Q8TCD1 76 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 C1QTNF4Q9BXJ3 329 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 FNDC4Q9H6D8 234 aaPredicted RBP9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 ZNF331Q9NQX6 463 aaPredicted RBP9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 OSTCQ9NRP0 149 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
SNRNP200-208ENST00000497539 MT-ND6P03923 174 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 EBI3Q14213 229 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 C10orf55Q5SWW7 151 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 EBLN2Q6P2I7 272 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 PPP1R27Q86WC6 154 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 SH2D7A6NKC9 451 aaPredicted RBP9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 C8orf86Q6ZUL3 223 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 TMEM167BQ9NRX6 74 aa9.16□□□□□ -0.94
SNRNP200-208ENST00000497539 ROS1P08922 2347 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 PKDREJQ9NTG1 2253 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 H3BRM9 83 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 ISLRO14498 428 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 HLA-DRB1P01911 266 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 PYYP10082 97 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 IGLL1P15814 213 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 SEC11AP67812 179 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 RNASEKQ6P5S7 137 aaKnown RBP9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 Q8N6K4 173 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 CYSLTR1Q9Y271 337 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 ABCA1O95477 2261 aa9.15□□□□□ -0.94
SNRNP200-208ENST00000497539 TPRP12270 2363 aaKnown RBP9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 IGKV1D-37A0A075B6S9 117 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 IGHV3-72A0A0B4J1Y9 119 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 M0R2Z0 102 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms