RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 GDF5OSQ5U4N7 250 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 STHQ8IWL8 128 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 RNF182Q8N6D2 247 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 OR2G3Q8NGZ4 309 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 SAT2Q96F10 170 aaPredicted RBP11.92□□□□□ -0.5
FAM3A-220ENST00000497506 SPATA25Q9BR10 227 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 SH3BGRL3Q9H299 93 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 ZNF586Q9NXT0 402 aa11.92□□□□□ -0.5
FAM3A-220ENST00000497506 H3BMM0 161 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 SLC17A3O00476 420 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 PYYP10082 97 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 M6PRP20645 277 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 HLA-DMBP28068 263 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 RAB2AP61019 212 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 RHOBP62745 196 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 GUK1Q16774 197 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 LRRC20Q8TCA0 184 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 SAV1Q9H4B6 383 aaPredicted RBP11.91□□□□□ -0.5
FAM3A-220ENST00000497506 ZMAT4Q9H898 229 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 RETNQ9HD89 108 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 ZNF331Q9NQX6 463 aaPredicted RBP11.91□□□□□ -0.5
FAM3A-220ENST00000497506 RPRMQ9NS64 109 aa11.91□□□□□ -0.5
FAM3A-220ENST00000497506 HUWE1Q7Z6Z7 4374 aaKnown RBP11.9□□□□□ -0.5
FAM3A-220ENST00000497506 A0A0D9SG52 128 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 F6UB75 175 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 UBE2CO00762 179 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 JTBO76095 146 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 HIST1H1EP10412 219 aaKnown RBP11.9□□□□□ -0.5
FAM3A-220ENST00000497506 HLA-DRB4P13762 266 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 SERF2P84101 59 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 FOXI2Q6ZQN5 318 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 AKAP14Q86UN6 197 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 GNPNAT1Q96EK6 184 aaPredicted RBP11.9□□□□□ -0.5
FAM3A-220ENST00000497506 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 ARPC5LQ9BPX5 153 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 SLC50A1Q9BRV3 221 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 OR51M1Q9H341 326 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 U3KQK5 164 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
FAM3A-220ENST00000497506 TRBV19A0A075B6N1 114 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 A0A0J9YX75 114 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 EIF3GO75821 320 aaKnown RBP eCLIP11.89□□□□□ -0.51
FAM3A-220ENST00000497506 C1QBP02746 253 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 PSG3Q16557 428 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 Q6ZWC4 215 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 OR10G4Q8NGN3 311 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 OR10G9Q8NGN4 311 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 OR10G7Q8NGN6 311 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 RCHY1Q96PM5 261 aa11.89□□□□□ -0.51
FAM3A-220ENST00000497506 ZNF253O75346 499 aa11.88□□□□□ -0.51
FAM3A-220ENST00000497506 NDUFB4O95168 129 aa11.88□□□□□ -0.51
FAM3A-220ENST00000497506 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-220ENST00000497506 CD300CQ08708 224 aa11.88□□□□□ -0.51
FAM3A-220ENST00000497506 FAM122CQ6P4D5 195 aa11.88□□□□□ -0.51
FAM3A-220ENST00000497506 RPP25LQ8N5L8 163 aaKnown RBP11.88□□□□□ -0.51
FAM3A-220ENST00000497506 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
FAM3A-220ENST00000497506 PAXXQ9BUH6 204 aa11.88□□□□□ -0.51
FAM3A-220ENST00000497506 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 BCL2L11O43521 198 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 MBP02144 154 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 SPP1P10451 314 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 DEFB135Q30KP9 77 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 LGALSLQ3ZCW2 172 aaPredicted RBP11.87□□□□□ -0.51
FAM3A-220ENST00000497506 EBLN2Q6P2I7 272 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 MORN3Q6PF18 240 aaPredicted RBP11.87□□□□□ -0.51
FAM3A-220ENST00000497506 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 ZNF738Q8NE65 137 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 RNF141Q8WVD5 230 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 CLUHP3Q96NS8 147 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 OVOL2Q9BRP0 275 aa11.87□□□□□ -0.51
FAM3A-220ENST00000497506 A8MTW9 85 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 OR7C2O60412 319 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 CA1P00915 261 aaPredicted RBP11.86□□□□□ -0.51
FAM3A-220ENST00000497506 OR10J4P0C629 311 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 NBEAP1P0C6P0 100 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 C4BPBP20851 252 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 TAS2R45P59539 299 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 PDE6HQ13956 83 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 KHDC3LQ587J8 217 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 RNF183Q96D59 192 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 CLEC5AQ9NY25 188 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 TP53TG1Q9Y2A0 90 aa11.86□□□□□ -0.51
FAM3A-220ENST00000497506 KANTRA0A1W2PQU2 76 aa11.85□□□□□ -0.51
FAM3A-220ENST00000497506 ZNF705FA8MVS1 300 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-220ENST00000497506 SPRY2O43597 315 aa11.85□□□□□ -0.51
FAM3A-220ENST00000497506 IGKV3-20P01619 116 aa11.85□□□□□ -0.51
FAM3A-220ENST00000497506 ZNF705DP0CH99 300 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-220ENST00000497506 ZNF705BP0CI00 300 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-220ENST00000497506 PRB4P10163 310 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-220ENST00000497506 CDC34P49427 236 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-220ENST00000497506 TMEM41BQ5BJD5 291 aa11.85□□□□□ -0.51
FAM3A-220ENST00000497506 OR4B1Q8NGF8 309 aa11.85□□□□□ -0.51
FAM3A-220ENST00000497506 RPUSD4Q96CM3 377 aaKnown RBP11.85□□□□□ -0.51
FAM3A-220ENST00000497506 HYLS1Q96M11 299 aa11.85□□□□□ -0.51
FAM3A-220ENST00000497506 PRAC2D3DTV9 90 aa11.84□□□□□ -0.51
FAM3A-220ENST00000497506 HMGB3O15347 200 aaKnown RBP11.84□□□□□ -0.51
FAM3A-220ENST00000497506 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms