RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ATP6V1G2-DDX39BF2Z307 99 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 J3KT08 172 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 M0R129 80 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 GGCTO75223 188 aaKnown RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 TNFSF15O95150 251 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 MT-ND4LP03901 98 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 OR10J4P0C629 311 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 MGST1P10620 155 aaKnown RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 S100GP29377 79 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 GTF2A1P52655 376 aaPredicted RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 MAXP61244 160 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 UBE2BP63146 152 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 DYNLT1P63172 113 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 HIST1H1AQ02539 215 aaPredicted RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 DIAPH2-AS1Q14236 149 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 ESRGQ1W209 222 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 TOMM20LQ6UXN7 152 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 PATE2Q6UY27 113 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 RPS19BP1Q86WX3 136 aaKnown RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 FAM24BQ8N5W8 94 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 OR2T10Q8NGZ9 312 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 TEX37Q96LM6 180 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 GPER1Q99527 375 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 C2orf88Q9BSF0 95 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 MRPL32Q9BYC8 188 aaKnown RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 OR2J1Q9GZK6 312 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 TPT1P8Q9HAU6 139 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 POPDC3Q9HBV1 291 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 BCL2L10Q9HD36 194 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 TNFSF18Q9UNG2 199 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 MYLKQ15746 1914 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 TNRC6BQ9UPQ9 1833 aaKnown RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 NINQ8N4C6 2090 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 MYOM3Q5VTT5 1437 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 CNTLNQ9NXG0 1405 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 BCORL1Q5H9F3 1711 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 PIK3C2AO00443 1686 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 USP54Q70EL1 1684 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 A0A096LPI6 279 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 TRAV14DV4A0A0A6YYC5 116 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 TRAV3A0A0B4J244 114 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 TRAV1-1A0A0B4J248 108 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 FAM236AA0A1B0GUQ0 79 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 FAM236BA0A1B0GV22 79 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 C9orf170A2RU37 121 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 C9JAW5 83 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 M0QZK8 103 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 DEGS1O15121 323 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 NDUFB3O43676 98 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 PITX3O75364 302 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 PROSCO94903 275 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 UBL3O95164 117 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 IGLV1-51P01701 117 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 TRGC2P03986 189 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 ASAH2BP0C7U1 165 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 MPC1LP0DKB6 136 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 HLA-EP13747 358 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 OGNP20774 298 aaKnown RBP0.72□□□□□ -2.29
VPS26A-208ENST00000497022 S100A11P31949 105 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 SSR2P43308 183 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 DYNLT3P51808 116 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 RHOGP84095 191 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 EIF3IQ13347 325 aaKnown RBP0.72□□□□□ -2.29
VPS26A-208ENST00000497022 CCDC58Q4VC31 144 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 MORN2Q502X0 79 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 RNASE10Q5GAN6 216 aaKnown RBP0.72□□□□□ -2.29
VPS26A-208ENST00000497022 EIF5AL1Q6IS14 154 aaKnown RBP0.72□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM14EPQ6UXP3 125 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 SOSTDC1Q6X4U4 206 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 PRR15Q8IV56 129 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 Q8IYB0 196 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 LINC00311Q8N616 119 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 SLC30A7Q8NEW0 376 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 OR9Q1Q8NGQ5 310 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 ZNF563Q8TA94 476 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 ZNF418Q8TF45 676 aaPredicted RBP0.72□□□□□ -2.29
VPS26A-208ENST00000497022 DYDC1Q8WWB3 177 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 TCEAL4Q96EI5 215 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 PFDN5Q99471 154 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 CCDC32Q9BV29 185 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 GGACTQ9BVM4 153 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 NPCDR1Q9BY65 106 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 LPAR5Q9H1C0 372 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 CACYBPQ9HB71 228 aaKnown RBP0.72□□□□□ -2.29
VPS26A-208ENST00000497022 OR5AC2Q9NZP5 309 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 MED11Q9P086 117 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 HSPB8Q9UJY1 196 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 HIGD1AQ9Y241 93 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 HS3ST2Q9Y278 367 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 U3KQ87 197 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 SPEF2Q9C093 1822 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 ARHGEF11O15085 1522 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 NISCHQ9Y2I1 1504 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 A2MP01023 1474 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 FGD6Q6ZV73 1430 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 ATG2AQ2TAZ0 1938 aa0.72□□□□□ -2.29
VPS26A-208ENST00000497022 IBTKQ9P2D0 1353 aaPredicted RBP0.71□□□□□ -2.3
VPS26A-208ENST00000497022 NCOA6Q14686 2063 aaPredicted RBP0.71□□□□□ -2.3
VPS26A-208ENST00000497022 ADGRB1O14514 1584 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 CCDC171Q6TFL3 1326 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms