RNA–Protein interactions for RNA: ENST00000496608.1

NFYC-219, Transcript of nuclear transcription factor Y subunit gamma, human

TSL 2

Gene NFYC, Length 1,965 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFYC-219	ENST00000496608	HIGD1B	Q9P298	99 aa		10.18	□□□□□ -0.78
NFYC-219	ENST00000496608	ATRX	P46100	2492 aa		10.18	□□□□□ -0.78
NFYC-219	ENST00000496608	SPTA1	P02549	2419 aa		10.18	□□□□□ -0.78
NFYC-219	ENST00000496608	SMG1	Q96Q15	3661 aa	Known RBP	10.18	□□□□□ -0.78
NFYC-219	ENST00000496608	SERTM2	A0A1B0GWG4	89 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	NCR2	O95944	276 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	RPL27A	P46776	148 aa	Known RBP	10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	C10orf55	Q5SWW7	151 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	S100A7A	Q86SG5	101 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	MCRIP2	Q9BUT9	160 aa	Known RBP	10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	NDUFS8	O00217	210 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	FABP2	P12104	132 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	UQCRFS1	P47985	274 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	ORMDL3	Q8N138	153 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	ZC2HC1A	Q96GY0	325 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	JMJD8	Q96S16	334 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.17	□□□□□ -0.78
NFYC-219	ENST00000496608	USP24	Q9UPU5	2620 aa		10.17	□□□□□ -0.78
NFYC-219	ENST00000496608		A0A096LNJ9	63 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	TMEM189	A5PLL7	270 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	IGHV3-48	P01763	117 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	TNFRSF1A	P19438	455 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	FAM104B	Q5XKR9	115 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	OR8A1	Q8NGG7	326 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	ZNF414	Q96IQ9	312 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	PRELID3A	Q96N28	172 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	SIGLEC8	Q9NYZ4	499 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	ZNRD1	Q9P1U0	126 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	PSG8	Q9UQ74	426 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	SPCS1	Q9Y6A9	102 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	NBEA	Q8NFP9	2946 aa		10.16	□□□□□ -0.78
NFYC-219	ENST00000496608	FBLL1	A6NHQ2	334 aa	Known RBP	10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	SLC25A17	O43808	307 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	SMIM13	P0DJ93	91 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	IFI27	P40305	119 aa	Predicted RBP	10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	RIPPLY3	P57055	190 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	PSG3	Q16557	428 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	MRGPRG-AS1	Q2M3A8	158 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	SRSF8	Q9BRL6	282 aa	Known RBP	10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	F11R	Q9Y624	299 aa	Known RBP	10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	INTS1	Q8N201	2190 aa	Known RBP	10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	ZGRF1	Q86YA3	2104 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	TRBV19	A0A075B6N1	114 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	ZNF785	A8K8V0	405 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	TMEM200B	Q69YZ2	307 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	COX8C	Q7Z4L0	72 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	PIP4P2	Q8N4L2	257 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	IFI27L1	Q96BM0	104 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	NGB	Q9NPG2	151 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	THYN1	Q9P016	225 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	FAM215A	Q9Y5M1	114 aa		10.15	□□□□□ -0.78
NFYC-219	ENST00000496608	TRAV8-1	A0A0A6YYK1	113 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	CRYGB	P07316	175 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	HLA-DRB4	P13762	266 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	PAX8	Q06710	450 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	PRR31	Q5SQ13	230 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	TNFRSF14	Q92956	283 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	SHANK2-AS3	Q9BTD1	123 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	HLA-DRB4	X5D2U9	266 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	LINC01546	A6NGU7	62 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	VSTM5	A8MXK1	200 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	SNAI2	O43623	268 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	LYZ	P61626	148 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	CACNG7	P62955	275 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	FOXE3	Q13461	319 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	PLGLA	Q15195	96 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	HCP5	Q6MZN7	132 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	VHLL	Q6RSH7	139 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	NUP37	Q8NFH4	326 aa		10.14	□□□□□ -0.79
NFYC-219	ENST00000496608	NAV3	Q8IVL0	2385 aa		10.13	□□□□□ -0.79
NFYC-219	ENST00000496608	CACNA1B	Q00975	2339 aa		10.13	□□□□□ -0.79
NFYC-219	ENST00000496608		D6R8Y8	96 aa		10.13	□□□□□ -0.79
NFYC-219	ENST00000496608	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
NFYC-219	ENST00000496608	PDE6H	Q13956	83 aa		10.13	□□□□□ -0.79
NFYC-219	ENST00000496608	SAMD5	Q5TGI4	173 aa		10.13	□□□□□ -0.79
NFYC-219	ENST00000496608	SEM1	Q6ZVN7	128 aa		10.13	□□□□□ -0.79
NFYC-219	ENST00000496608	VKORC1	Q9BQB6	163 aa		10.13	□□□□□ -0.79
NFYC-219	ENST00000496608	EPG5	Q9HCE0	2579 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608		H3BRN7	92 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	CCL3L1	P16619	93 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	SIGLEC15	Q6ZMC9	328 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	EXOC3-AS1	Q8N2X6	119 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	RASL11B	Q9BPW5	248 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	SMPX	Q9UHP9	88 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	INSIG2	Q9Y5U4	225 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608		H3BTX0	84 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608		J3QR89	54 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	NDUFB3	O43676	98 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	TMEM11	P17152	192 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	SRSF2	Q01130	221 aa	Known RBP	10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	SAMD13	Q5VXD3	122 aa		10.12	□□□□□ -0.79
NFYC-219	ENST00000496608	NDUFS7	O75251	213 aa		10.11	□□□□□ -0.79
NFYC-219	ENST00000496608	CRIP1	P50238	77 aa		10.11	□□□□□ -0.79
NFYC-219	ENST00000496608	RUSC1-AS1	Q66K80	236 aa		10.11	□□□□□ -0.79
NFYC-219	ENST00000496608	RNF5	Q99942	180 aa		10.11	□□□□□ -0.79
NFYC-219	ENST00000496608	ZMAT4	Q9H898	229 aa		10.11	□□□□□ -0.79
NFYC-219	ENST00000496608	TPSG1	Q9NRR2	321 aa		10.11	□□□□□ -0.79
NFYC-219	ENST00000496608	HILPDA	Q9Y5L2	63 aa		10.11	□□□□□ -0.79
NFYC-219	ENST00000496608	COL6A6	A6NMZ7	2263 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms