RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 LOC105371267A0A1B0GV96 52 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 PIAS1O75925 651 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 DNAL4O96015 105 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 ZNF25P17030 456 aaPredicted RBP1.54□□□□□ -2.16
SSR3-208ENST00000496050 CRYBA4P53673 196 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 C1orf140Q5VVS0 124 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 FAM24BQ8N5W8 94 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 CHCHD1Q96BP2 118 aaKnown RBP1.54□□□□□ -2.16
SSR3-208ENST00000496050 LINC00052Q96N35 136 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 DDA1Q9BW61 102 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 CACYBPQ9HB71 228 aaKnown RBP1.54□□□□□ -2.16
SSR3-208ENST00000496050 LAMTOR3Q9UHA4 124 aa1.54□□□□□ -2.16
SSR3-208ENST00000496050 ODAMA1E959 279 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 LAMB4A4D0S4 1761 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 K7ERJ3 54 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 CXCL8P10145 99 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 IDO1P14902 403 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 SARNPP82979 210 aaKnown RBP1.53□□□□□ -2.16
SSR3-208ENST00000496050 TFAMQ00059 246 aaKnown RBP1.53□□□□□ -2.16
SSR3-208ENST00000496050 SMIM15Q7Z3B0 74 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 PCBD2Q9H0N5 130 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 C19orf12Q9NSK7 152 aa1.53□□□□□ -2.16
SSR3-208ENST00000496050 SCN3AQ9NY46 2000 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 A0A087WSZ3 146 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 GNG14A0A1W2PPG7 69 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 OR2T8A6NH00 312 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 B4DSR2 109 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 GPR31O00270 319 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 RER1O15258 196 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 CCL25O15444 150 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 GLRXP35754 106 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 SPRNQ5BIV9 151 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 C1orf134Q5TEV5 83 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 FKBP1CQ5VVH2 108 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 TEN1Q86WV5 123 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 PYDC1Q8WXC3 89 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 RAB37Q96AX2 223 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 OR2H1Q9GZK4 316 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 TMEM14CQ9P0S9 112 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 MCM3APO60318 1980 aa1.52□□□□□ -2.17
SSR3-208ENST00000496050 ZCCHC11Q5TAX3 1644 aaKnown RBP1.51□□□□□ -2.17
SSR3-208ENST00000496050 ROS1P08922 2347 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 MYLKQ15746 1914 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.51□□□□□ -2.17
SSR3-208ENST00000496050 IGHV1-58A0A0C4DH39 117 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 IGLV1-51P01701 117 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 NBEAP1P0C6P0 100 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 ARPC4P59998 168 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 MSMO1Q15800 293 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 RTL8BQ17RB0 113 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 LINC00322Q6ZN03 302 aaPredicted RBP1.51□□□□□ -2.17
SSR3-208ENST00000496050 ARPINQ7Z6K5 226 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 OR5AS1Q8N127 324 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 DYDC1Q8WWB3 177 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 HYLS1Q96M11 299 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 PEAK1Q9H792 1746 aa1.51□□□□□ -2.17
SSR3-208ENST00000496050 A0A1B0GV72 72 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 F8W1H4 67 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 NUPR1O60356 82 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 PFDN1O60925 122 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 CST7O76096 145 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 IFNA21P01568 189 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 RPL35P42766 123 aaKnown RBP1.5□□□□□ -2.17
SSR3-208ENST00000496050 HBBP68871 147 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 LTC4SQ16873 150 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 LRRC18Q8N456 261 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 GGACTQ9BVM4 153 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 MED11Q9P086 117 aa1.5□□□□□ -2.17
SSR3-208ENST00000496050 TENM1Q9UKZ4 2725 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 TRAV27A0A087WT01 109 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 hDV103S1A0JD37 113 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 H3BRM9 83 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 LYRM1O43325 122 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 GKN2Q86XP6 184 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 PLPP5Q8NEB5 264 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 BATF3Q9NR55 127 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 FRMPD1Q5SYB0 1578 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 CECR2Q9BXF3 1484 aa1.49□□□□□ -2.17
SSR3-208ENST00000496050 IGLV3-32A0A0A0MS00 114 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 MAP1LC3B2A6NCE7 125 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 COX7CP15954 63 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 PSG9Q00887 426 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 KRTAP26-1Q6PEX3 210 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 DCUN1D2Q6PH85 259 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 HAGHLQ6PII5 290 aaPredicted RBP1.48□□□□□ -2.17
SSR3-208ENST00000496050 Q8TAT8 98 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 BORCS8Q96FH0 119 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 NDUFAF1Q9Y375 327 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 N4BP2Q86UW6 1770 aaPredicted RBP1.48□□□□□ -2.17
SSR3-208ENST00000496050 TNRC6AQ8NDV7 1962 aaKnown RBP1.48□□□□□ -2.17
SSR3-208ENST00000496050 PBRM1Q86U86 1689 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 TECPR2O15040 1411 aa1.48□□□□□ -2.17
SSR3-208ENST00000496050 S100A12P80511 92 aa1.47□□□□□ -2.17
SSR3-208ENST00000496050 TMEM78Q5T7P6 136 aa1.47□□□□□ -2.17
SSR3-208ENST00000496050 TMEM14EPQ6UXP3 125 aa1.47□□□□□ -2.17
SSR3-208ENST00000496050 PHF5AQ7RTV0 110 aaKnown RBP1.47□□□□□ -2.17
SSR3-208ENST00000496050 PRR15Q8IV56 129 aa1.47□□□□□ -2.17
SSR3-208ENST00000496050 AMELYQ99218 206 aa1.47□□□□□ -2.17
SSR3-208ENST00000496050 E9PCH4 1651 aa1.47□□□□□ -2.17
SSR3-208ENST00000496050 MYO5AQ9Y4I1 1855 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms