RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CLEC5AQ9NY25 188 aa12.69□□□□□ -0.38
HDAC6-235ENST00000495515 DNAH3Q8TD57 4116 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 OR7C2O60412 319 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 SPP1P10451 314 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 TPT1P13693 172 aaKnown RBP12.68□□□□□ -0.38
HDAC6-235ENST00000495515 CDC34P49427 236 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-235ENST00000495515 CD300CQ08708 224 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 AKR1C8PQ5T2L2 129 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 STHQ8IWL8 128 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 FAM167A-AS1Q96KT0 104 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 C17orf77Q96MU5 243 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 PAXXQ9BUH6 204 aa12.68□□□□□ -0.38
HDAC6-235ENST00000495515 ACTR3CQ9C0K3 210 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-235ENST00000495515 H3BQ15 152 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 ZNF253O75346 499 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 SEC11BP0C7V7 166 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 APOC4P55056 127 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 PDE6HQ13956 83 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 PQLC2Q6ZP29 291 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 BAP18Q8IXM2 172 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 CITED4Q96RK1 184 aa12.67□□□□□ -0.38
HDAC6-235ENST00000495515 TGP01266 2768 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 RBMY1BA6NDE4 496 aaKnown RBP12.66□□□□□ -0.38
HDAC6-235ENST00000495515 RBMY1EA6NEQ0 496 aaKnown RBP12.66□□□□□ -0.38
HDAC6-235ENST00000495515 RBMY1DP0C7P1 496 aaKnown RBP12.66□□□□□ -0.38
HDAC6-235ENST00000495515 PYYP10082 97 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 PSG9Q00887 426 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 ZNF124Q15973 351 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 EIF5AL1Q6IS14 154 aaKnown RBP12.66□□□□□ -0.38
HDAC6-235ENST00000495515 EBLN2Q6P2I7 272 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 LINC00322Q6ZN03 302 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-235ENST00000495515 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 RPP25LQ8N5L8 163 aaKnown RBP12.66□□□□□ -0.38
HDAC6-235ENST00000495515 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 RNF141Q8WVD5 230 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 ZNF331Q9NQX6 463 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-235ENST00000495515 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
HDAC6-235ENST00000495515 PRKDCP78527 4128 aaKnown RBP12.65□□□□□ -0.38
HDAC6-235ENST00000495515 TRBV19A0A075B6N1 114 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 KIR2DL5BA0A0G2JN68 375 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 KIR2DL5BA0A0G2JPC4 375 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 SNRPCP09234 159 aaKnown RBP12.65□□□□□ -0.38
HDAC6-235ENST00000495515 NBEAP1P0C6P0 100 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 NHLRC4P0CG21 123 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-235ENST00000495515 UBE2L3P68036 154 aaKnown RBP12.65□□□□□ -0.38
HDAC6-235ENST00000495515 KIR2DL5AQ8N109 375 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 KIR2DL5BQ8NHK3 375 aa12.65□□□□□ -0.38
HDAC6-235ENST00000495515 KNCNA6PVL3 124 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 UMAD1C9J7I0 102 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 H3BTX0 84 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 OR10J4P0C629 311 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
HDAC6-235ENST00000495515 PSG3Q16557 428 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 HAGHQ16775 308 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 SLC51BQ86UW2 128 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 C9orf62Q8N4C0 152 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 BLNKQ8WV28 456 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 RAB24Q969Q5 203 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-235ENST00000495515 SAV1Q9H4B6 383 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-235ENST00000495515 AAMDCQ9H7C9 122 aa12.64□□□□□ -0.39
HDAC6-235ENST00000495515 UBE2CO00762 179 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 STAG3L2P0CL84 134 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 STAG3L3P0CL85 134 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 IGFL4Q6B9Z1 124 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 SBSPONQ8IVN8 264 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 FXYD5Q96DB9 178 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 ASCL2Q99929 193 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 PRELID1Q9Y255 219 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
HDAC6-235ENST00000495515 CTXND1A0A1B0GTU2 59 aa12.62□□□□□ -0.39
HDAC6-235ENST00000495515 SLC17A3O00476 420 aa12.62□□□□□ -0.39
HDAC6-235ENST00000495515 NUTF2P61970 127 aaKnown RBP12.62□□□□□ -0.39
HDAC6-235ENST00000495515 MORN3Q6PF18 240 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-235ENST00000495515 TRPT1Q86TN4 253 aaKnown RBP12.62□□□□□ -0.39
HDAC6-235ENST00000495515 CSTL1Q9H114 145 aa12.62□□□□□ -0.39
HDAC6-235ENST00000495515 ZMAT4Q9H898 229 aa12.62□□□□□ -0.39
HDAC6-235ENST00000495515 H3BMM0 161 aa12.61□□□□□ -0.39
HDAC6-235ENST00000495515 HMGB3O15347 200 aaKnown RBP12.61□□□□□ -0.39
HDAC6-235ENST00000495515 DUSP14O95147 198 aaKnown RBP12.61□□□□□ -0.39
HDAC6-235ENST00000495515 CXorf1O96002 111 aa12.61□□□□□ -0.39
HDAC6-235ENST00000495515 ARL14EPLP0DKL9 152 aa12.61□□□□□ -0.39
HDAC6-235ENST00000495515 LYPD1Q8N2G4 141 aa12.61□□□□□ -0.39
HDAC6-235ENST00000495515 RPUSD4Q96CM3 377 aaKnown RBP12.61□□□□□ -0.39
HDAC6-235ENST00000495515 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
HDAC6-235ENST00000495515 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
HDAC6-235ENST00000495515 A0A0J9YX75 114 aa12.6□□□□□ -0.39
HDAC6-235ENST00000495515 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDAC6-235ENST00000495515 NDUFB4O95168 129 aa12.6□□□□□ -0.39
HDAC6-235ENST00000495515 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
HDAC6-235ENST00000495515 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
HDAC6-235ENST00000495515 OR4B1Q8NGF8 309 aa12.6□□□□□ -0.39
HDAC6-235ENST00000495515 TMED6Q8WW62 240 aa12.6□□□□□ -0.39
HDAC6-235ENST00000495515 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms