RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 FAM78BQ5VT40 261 aa12.67□□□□□ -0.38
SNX17-209ENST00000494893 STXBP6Q8NFX7 210 aa12.67□□□□□ -0.38
SNX17-209ENST00000494893 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
SNX17-209ENST00000494893 RAB24Q969Q5 203 aa12.67□□□□□ -0.38
SNX17-209ENST00000494893 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
SNX17-209ENST00000494893 NARS2Q96I59 477 aaKnown RBP12.67□□□□□ -0.38
SNX17-209ENST00000494893 RCHY1Q96PM5 261 aa12.67□□□□□ -0.38
SNX17-209ENST00000494893 MRPL32Q9BYC8 188 aaKnown RBP12.67□□□□□ -0.38
SNX17-209ENST00000494893 SEPSECSQ9HD40 501 aaKnown RBP12.67□□□□□ -0.38
SNX17-209ENST00000494893 RETNQ9HD89 108 aa12.67□□□□□ -0.38
SNX17-209ENST00000494893 DNASE2O00115 360 aaPredicted RBP12.66□□□□□ -0.38
SNX17-209ENST00000494893 PAFAH1B2P68402 229 aa12.66□□□□□ -0.38
SNX17-209ENST00000494893 SSX7Q7RTT5 188 aa12.66□□□□□ -0.38
SNX17-209ENST00000494893 SLC25A22Q9H936 323 aa12.66□□□□□ -0.38
SNX17-209ENST00000494893 FUT9Q9Y231 359 aa12.66□□□□□ -0.38
SNX17-209ENST00000494893 HIGD1AQ9Y241 93 aa12.66□□□□□ -0.38
SNX17-209ENST00000494893 TRAV1-1A0A0B4J248 108 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 SPATA31B1PQ5VZV4 182 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 SIGLEC15Q6ZMC9 328 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 MIR17HGQ75NE6 70 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 LINC00305Q7Z4B0 112 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 LYPD6BQ8NI32 183 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 SFT2D1Q8WV19 159 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 C17orf77Q96MU5 243 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 UHRF2Q96PU4 802 aa12.65□□□□□ -0.38
SNX17-209ENST00000494893 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
SNX17-209ENST00000494893 MAP1LC3B2A6NCE7 125 aa12.64□□□□□ -0.39
SNX17-209ENST00000494893 HELTA6NFD8 242 aa12.64□□□□□ -0.39
SNX17-209ENST00000494893 DEFB131AP59861 70 aa12.64□□□□□ -0.39
SNX17-209ENST00000494893 LCN15Q6UWW0 184 aa12.64□□□□□ -0.39
SNX17-209ENST00000494893 S100A7AQ86SG5 101 aa12.64□□□□□ -0.39
SNX17-209ENST00000494893 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
SNX17-209ENST00000494893 SLC25A39Q9BZJ4 359 aaPredicted RBP12.64□□□□□ -0.39
SNX17-209ENST00000494893 MAP1LC3BQ9GZQ8 125 aa12.64□□□□□ -0.39
SNX17-209ENST00000494893 H3BRN7 92 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
SNX17-209ENST00000494893 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNX17-209ENST00000494893 HBE1P02100 147 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 STAG3L2P0CL84 134 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 STAG3L3P0CL85 134 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 S100A7P31151 101 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 MORN5Q5VZ52 161 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 LEMD1Q68G75 181 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 SHANK2-AS3Q9BTD1 123 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 HRH4Q9H3N8 390 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 ZMAT4Q9H898 229 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 NRN1Q9NPD7 142 aa12.63□□□□□ -0.39
SNX17-209ENST00000494893 ZNF98A6NK75 572 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
SNX17-209ENST00000494893 CMC4P56277 68 aaPredicted RBP12.62□□□□□ -0.39
SNX17-209ENST00000494893 TAS2R45P59539 299 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 C1orf194Q5T5A4 169 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 SCRT1Q9BWW7 348 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 DNAH7Q8WXX0 4024 aa12.62□□□□□ -0.39
SNX17-209ENST00000494893 TRAV5A0A0B4J249 113 aa12.61□□□□□ -0.39
SNX17-209ENST00000494893 SOCS3O14543 225 aa12.61□□□□□ -0.39
SNX17-209ENST00000494893 FGF8P55075 233 aaPredicted RBP12.61□□□□□ -0.39
SNX17-209ENST00000494893 WWC2-AS2Q96NR7 200 aa12.61□□□□□ -0.39
SNX17-209ENST00000494893 SLC25A2Q9BXI2 301 aa12.61□□□□□ -0.39
SNX17-209ENST00000494893 PFDN2Q9UHV9 154 aa12.61□□□□□ -0.39
SNX17-209ENST00000494893 RNF24Q9Y225 148 aa12.61□□□□□ -0.39
SNX17-209ENST00000494893 CXorf1O96002 111 aa12.6□□□□□ -0.39
SNX17-209ENST00000494893 KHDC3LQ587J8 217 aa12.6□□□□□ -0.39
SNX17-209ENST00000494893 PQLC2Q6ZP29 291 aa12.6□□□□□ -0.39
SNX17-209ENST00000494893 A0A1B0GV50 99 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 LINC00862A6NCI5 91 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 KNCNA6PVL3 124 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 CCL20P78556 96 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 OR8I2Q8N0Y5 310 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 ZNF503Q96F45 646 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 OVOL2Q9BRP0 275 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 EDA2RQ9HAV5 297 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 MED9Q9NWA0 146 aa12.59□□□□□ -0.39
SNX17-209ENST00000494893 KIR2DL5BA0A0G2JN68 375 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 KIR2DL5BA0A0G2JPC4 375 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 OR7C2O60412 319 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 GCHFRP30047 84 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 KIR2DL5AQ8N109 375 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 KIR2DL5BQ8NHK3 375 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 OR51M1Q9H341 326 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 TMEM14CQ9P0S9 112 aa12.58□□□□□ -0.4
SNX17-209ENST00000494893 PSMB3P49720 205 aa12.57□□□□□ -0.4
SNX17-209ENST00000494893 APOC4P55056 127 aa12.57□□□□□ -0.4
SNX17-209ENST00000494893 DEFB1P60022 68 aa12.57□□□□□ -0.4
SNX17-209ENST00000494893 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
SNX17-209ENST00000494893 TRPT1Q86TN4 253 aaKnown RBP12.57□□□□□ -0.4
SNX17-209ENST00000494893 PAXXQ9BUH6 204 aa12.57□□□□□ -0.4
SNX17-209ENST00000494893 TMPRSS5Q9H3S3 457 aa12.57□□□□□ -0.4
SNX17-209ENST00000494893 MRPS12O15235 138 aaKnown RBP12.56□□□□□ -0.4
SNX17-209ENST00000494893 GIG44P09565 113 aaPredicted RBP12.56□□□□□ -0.4
SNX17-209ENST00000494893 RPL7P18124 248 aaKnown RBP12.56□□□□□ -0.4
SNX17-209ENST00000494893 DEFB135Q30KP9 77 aa12.56□□□□□ -0.4
SNX17-209ENST00000494893 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.56□□□□□ -0.4
SNX17-209ENST00000494893 BPIFA4PQ86YQ2 179 aa12.56□□□□□ -0.4
SNX17-209ENST00000494893 IQCF2Q8IXL9 164 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms