RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 HES1Q14469 280 aa3.78□□□□□ -1.8
PRKD3-210ENST00000494667 UTF1Q5T230 341 aa3.78□□□□□ -1.8
PRKD3-210ENST00000494667 ZC2HC1BQ5TFG8 222 aa3.78□□□□□ -1.8
PRKD3-210ENST00000494667 FAM53AQ6NSI3 398 aaPredicted RBP3.78□□□□□ -1.8
PRKD3-210ENST00000494667 C1orf229Q6ZS94 237 aaPredicted RBP3.78□□□□□ -1.8
PRKD3-210ENST00000494667 ANKRD29Q8N6D5 301 aa3.78□□□□□ -1.8
PRKD3-210ENST00000494667 DUSP14O95147 198 aaKnown RBP3.77□□□□□ -1.81
PRKD3-210ENST00000494667 MT-CO3P00414 261 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 CRIP1P50238 77 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 SSR4P51571 173 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ZNF134P52741 427 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 LINC00205P59089 165 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 TNFAIP6P98066 277 aaPredicted RBP3.77□□□□□ -1.81
PRKD3-210ENST00000494667 SDIM1Q6ZPB5 146 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 TMEM167AQ8TBQ9 72 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 CXXC4Q9H2H0 198 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 SELENOKQ9Y6D0 94 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ESPL1Q14674 2120 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 NCBP2LA6PVI3 153 aaKnown RBP3.77□□□□□ -1.81
PRKD3-210ENST00000494667 LGALS1P09382 135 aaKnown RBP3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ID1P41134 155 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 C1orf61Q13536 156 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 EBI3Q14213 229 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 TM4SF20Q53R12 229 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 TTC32Q5I0X7 151 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ASPHD1Q5U4P2 390 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 IL17RELQ6ZVW7 336 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 C8orf31Q8N9H6 132 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 MRPL20Q9BYC9 149 aaKnown RBP3.77□□□□□ -1.81
PRKD3-210ENST00000494667 TRAV4A0A0B4J268 109 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 CXCL13O43927 109 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 TCL1BO95988 128 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 FAM159AQ6UWV7 190 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ZNF833PQ6ZTB9 187 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ZNF575Q86XF7 245 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 AMN1Q8IY45 258 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 VKORC1L1Q8N0U8 176 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 UBALD1Q8TB05 177 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 PPDPFQ9H3Y8 114 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 USF3Q68DE3 2245 aa3.77□□□□□ -1.81
PRKD3-210ENST00000494667 ARID1BQ8NFD5 2236 aaPredicted RBP3.77□□□□□ -1.81
PRKD3-210ENST00000494667 SMIM9A6NGZ8 99 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 MRPL33O75394 65 aaKnown RBP3.76□□□□□ -1.81
PRKD3-210ENST00000494667 CRYGBP07316 175 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 COX6A1P12074 109 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 PDE6HQ13956 83 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 RPL39P5Q59GN2 51 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 RBMXL3Q8N7X1 1067 aaKnown RBP3.76□□□□□ -1.81
PRKD3-210ENST00000494667 SRSF12Q8WXF0 261 aaKnown RBP3.76□□□□□ -1.81
PRKD3-210ENST00000494667 TPPP3Q9BW30 176 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 RAI1Q7Z5J4 1906 aaPredicted RBP3.76□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV3OR15-7A0A075B7D8 119 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 CGB1A6NKQ9 187 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 F8VRH5 84 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 MRPS12O15235 138 aaKnown RBP3.76□□□□□ -1.81
PRKD3-210ENST00000494667 SAA2P0DJI9 122 aaPredicted RBP3.76□□□□□ -1.81
PRKD3-210ENST00000494667 SCGB1C2P0DMR2 95 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 ERHP84090 104 aaKnown RBP3.76□□□□□ -1.81
PRKD3-210ENST00000494667 TFF2Q03403 129 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 C17orf58Q2M2W7 97 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 TEX36Q5VZQ5 186 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 PROCRQ9UNN8 238 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 H7C1H1 209 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 HLA-DMBP28068 263 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 MZT1Q08AG7 82 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 MEIG1Q5JSS6 88 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 GTSCR1Q86UQ5 136 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 CD177Q8N6Q3 437 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 POM121L12Q8N7R1 296 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 KIR2DL4Q99706 377 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 FZR1Q9UM11 496 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 ABCA7Q8IZY2 2146 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 DSCAML1Q8TD84 2053 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV4-4A0A075B6R2 117 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 TMEM240Q5SV17 173 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 C10orf126Q8N4M7 172 aa3.76□□□□□ -1.81
PRKD3-210ENST00000494667 TRBV19A0A075B6N1 114 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 A0A0B4J2C4 111 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 LINC01549A6NIU2 74 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 J3KT08 172 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 PPIFP30405 207 aaKnown RBP3.75□□□□□ -1.81
PRKD3-210ENST00000494667 LEPP41159 167 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 LYZL1Q6UWQ5 148 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 SIGLEC15Q6ZMC9 328 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 RPP25Q9BUL9 199 aaKnown RBP3.75□□□□□ -1.81
PRKD3-210ENST00000494667 CALYQ9NYX4 217 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 SRRM5B3KS81 715 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 LGALS9O00182 355 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 TM4SF5O14894 197 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 WT1P19544 449 aaPredicted RBP3.75□□□□□ -1.81
PRKD3-210ENST00000494667 LINC00526Q96FQ7 95 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 C12orf49Q9H741 205 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 MRPL35Q9NZE8 188 aaKnown RBP3.75□□□□□ -1.81
PRKD3-210ENST00000494667 DKK4Q9UBT3 224 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 CKS2P33552 79 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 PSMB2P49721 201 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 Q71RC1 249 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms