RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 CXorf1O96002 111 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 IGHV3-48P01763 117 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 OR5G3P0C626 314 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 MLANAQ16655 118 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 ACY3Q96HD9 319 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 RNF2Q99496 336 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 MRPL32Q9BYC8 188 aaKnown RBP9.84□□□□□ -0.83
ERCC3-209ENST00000494464 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 OR4C46A6NHA9 309 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 ZNF207O43670 478 aaKnown RBP9.83□□□□□ -0.84
ERCC3-209ENST00000494464 RND2P52198 227 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 MEF2BQ02080 365 aaPredicted RBP9.83□□□□□ -0.84
ERCC3-209ENST00000494464 BTN1A1Q13410 526 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 ZNF600Q6ZNG1 722 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 CYB561D1Q8N8Q1 229 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 NPIPB3Q92617 1050 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 TRGV9Q99603 122 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 FAM110AQ9BQ89 295 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 TXNDC17Q9BRA2 123 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 FUT9Q9Y231 359 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 ARL2-SNX15V9GYD0 113 aa9.83□□□□□ -0.84
ERCC3-209ENST00000494464 TMEM250H0YL14 139 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 DNASE2O00115 360 aaPredicted RBP9.82□□□□□ -0.84
ERCC3-209ENST00000494464 CHEK1O14757 476 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 HMGB3O15347 200 aaKnown RBP9.82□□□□□ -0.84
ERCC3-209ENST00000494464 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 FAM90A2PQ658T7 463 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 OR1L4Q8NGR5 311 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 OR4X1Q8NH49 305 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 GATAD1Q8WUU5 269 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 PFDN5Q99471 154 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 RHPN1-AS1Q9BWJ2 59 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
ERCC3-209ENST00000494464 MRPL36Q9P0J6 103 aaKnown RBP9.82□□□□□ -0.84
ERCC3-209ENST00000494464 DYNC2H1Q8NCM8 4307 aaKnown RBP9.81□□□□□ -0.84
ERCC3-209ENST00000494464 LOC102724200A0A096LPH7 203 aaPredicted RBP9.81□□□□□ -0.84
ERCC3-209ENST00000494464 CLN5O75503 358 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 SCGB2A1O75556 95 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 EIF3GO75821 320 aaKnown RBP eCLIP9.81□□□□□ -0.84
ERCC3-209ENST00000494464 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 BMI1P35226 326 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 TAS2R45P59539 299 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 RHEBQ15382 184 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 ODF3L2Q3SX64 289 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 TOMM20LQ6UXN7 152 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 SEPSECSQ9HD40 501 aaKnown RBP9.81□□□□□ -0.84
ERCC3-209ENST00000494464 RETNQ9HD89 108 aa9.81□□□□□ -0.84
ERCC3-209ENST00000494464 GCHFRP30047 84 aa9.8□□□□□ -0.84
ERCC3-209ENST00000494464 FAM78BQ5VT40 261 aa9.8□□□□□ -0.84
ERCC3-209ENST00000494464 PQLC2Q6ZP29 291 aa9.8□□□□□ -0.84
ERCC3-209ENST00000494464 NIPSNAP3BQ9BS92 247 aa9.8□□□□□ -0.84
ERCC3-209ENST00000494464 PUS1Q9Y606 427 aaKnown RBP eCLIP9.8□□□□□ -0.84
ERCC3-209ENST00000494464 RYR3Q15413 4870 aa9.8□□□□□ -0.84
ERCC3-209ENST00000494464 TRAV30A0A087WSZ9 112 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 FAM74A7A6NL05 159 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 H3BQ15 152 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 PDE6DO43924 150 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 PAGE4O60829 102 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 PLP1P60201 277 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 PNRC1Q12796 327 aaPredicted RBP9.79□□□□□ -0.84
ERCC3-209ENST00000494464 FAM74A3Q4VXF1 159 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 SPATA31B1PQ5VZV4 182 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 MIR17HGQ75NE6 70 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 IQCF2Q8IXL9 164 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 TMEM167BQ9NRX6 74 aa9.79□□□□□ -0.84
ERCC3-209ENST00000494464 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 ELOA3CA0A087WX78 387 aaPredicted RBP9.78□□□□□ -0.84
ERCC3-209ENST00000494464 IGHV3-49A0A0A0MS15 119 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 C11orf94C9JXX5 98 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 F6UZH7 168 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 COX7A2P2O60397 106 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 IGKV1-17P01599 117 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 FABP1P07148 127 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 IGLC1P0CG04 106 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 GATA2P23769 480 aaPredicted RBP9.78□□□□□ -0.84
ERCC3-209ENST00000494464 ZNF90Q03938 601 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 TMEM37Q8WXS4 190 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 TVP23CQ96ET8 276 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 DNAJC4Q9NNZ3 241 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
ERCC3-209ENST00000494464 IGHV3OR16-13A0A075B7E8 117 aa9.77□□□□□ -0.84
ERCC3-209ENST00000494464 IGHV3-74A0A0B4J1X5 117 aa9.77□□□□□ -0.84
ERCC3-209ENST00000494464 M0R036 132 aa9.77□□□□□ -0.84
ERCC3-209ENST00000494464 APOC4P55056 127 aa9.77□□□□□ -0.84
ERCC3-209ENST00000494464 CMC4P56277 68 aaPredicted RBP9.77□□□□□ -0.84
ERCC3-209ENST00000494464 C10orf113Q5VZT2 155 aa9.77□□□□□ -0.84
ERCC3-209ENST00000494464 TCF24Q7RTU0 167 aa9.77□□□□□ -0.84
ERCC3-209ENST00000494464 SMCO4Q9NRQ5 59 aa9.77□□□□□ -0.84
ERCC3-209ENST00000494464 CSMD3Q7Z407 3707 aa9.77□□□□□ -0.85
ERCC3-209ENST00000494464 A0A087WWC5 75 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 KIR2DL5BA0A0G2JN68 375 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 KIR2DL5BA0A0G2JPC4 375 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 A0A1W2PS18 150 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 C7orf77A4D0Y5 90 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 B4DEV8 164 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 UBE2CO00762 179 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms