RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TLN2Q9Y4G6 2542 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 TRBV24-1A0A075B6N3 115 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 PGPA6NDG6 321 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 DNAJC9-AS1A6NH13 148 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 PPP5D1E7EU14 171 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 K7EN84 100 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 M0R036 132 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 LGALS9O00182 355 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 PEX7O00628 323 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 LY6G6DO95868 133 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 LTAP01374 205 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 MT-ND4LP03901 98 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 PF4V1P10720 104 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 HNF1AP20823 631 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 ARL3P36405 182 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 SLC35B1P78383 322 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 FOXL1Q12952 345 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 ELOBQ15370 118 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 TCTEX1D4Q5JR98 221 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 TMEM88Q6PEY1 159 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 C10orf99Q6UWK7 81 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 FAM231DQ6ZW35 169 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 REC114Q7Z4M0 266 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 OR4F17Q8NGA8 305 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 ATG101Q9BSB4 218 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 C20orf24Q9BUV8 137 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 YAE1D1Q9NRH1 226 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 PPP1R14DQ9NXH3 145 aa5.19□□□□□ -1.58
MSH5-217ENST00000494458 SERTM2A0A1B0GWG4 89 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 FBLL1A6NHQ2 334 aaKnown RBP5.18□□□□□ -1.58
MSH5-217ENST00000494458 A8MWP6 167 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 SLC17A3O00476 420 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 ISLRO14498 428 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 SOCS3O14543 225 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 PPP1R2P9O14990 202 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 NDUFA7O95182 113 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 APOHP02749 345 aaPredicted RBP5.18□□□□□ -1.58
MSH5-217ENST00000494458 RPLP1P05386 114 aaKnown RBP5.18□□□□□ -1.58
MSH5-217ENST00000494458 LGALS1P09382 135 aaKnown RBP5.18□□□□□ -1.58
MSH5-217ENST00000494458 SRP14P37108 136 aaKnown RBP5.18□□□□□ -1.58
MSH5-217ENST00000494458 CEBPGP53567 150 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 PSG9Q00887 426 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 UNQ9165/PRO28630Q6UXU0 137 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 IL17RELQ6ZVW7 336 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 C1QL4Q86Z23 238 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 MRPL53Q96EL3 112 aaKnown RBP5.18□□□□□ -1.58
MSH5-217ENST00000494458 LINC00479Q96M42 142 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 METTL26Q96S19 204 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 ZNF331Q9NQX6 463 aaPredicted RBP5.18□□□□□ -1.58
MSH5-217ENST00000494458 OSTCQ9NRP0 149 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 CLEC5AQ9NY25 188 aa5.18□□□□□ -1.58
MSH5-217ENST00000494458 TRAV8-2A0A0B4J237 113 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 IGHV7-4-1A0A0J9YVY3 117 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 ZNF320A2RRD8 509 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 RBAKDNA6NC62 111 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 DIRC3C9JPN6 131 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 PHOX2AO14813 284 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 TYMSP04818 313 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 AKR1C3P42330 323 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 GNG4P50150 75 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 CNN1P51911 297 aaKnown RBP5.17□□□□□ -1.58
MSH5-217ENST00000494458 KLF5Q13887 457 aaPredicted RBP5.17□□□□□ -1.58
MSH5-217ENST00000494458 ADIRFQ15847 76 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 ZNF674Q2M3X9 581 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 CENPWQ5EE01 88 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 LCNL1Q6ZST4 164 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 OR8I2Q8N0Y5 310 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 EXOC3-AS1Q8N2X6 119 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 KLHDC1Q8N7A1 406 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 TMEM75Q8N9X5 138 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 BLNKQ8WV28 456 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 SFRP2Q96HF1 295 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 FMC1Q96HJ9 113 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 GNB4Q9HAV0 340 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 DAZ1Q9NQZ3 744 aaKnown RBP5.17□□□□□ -1.58
MSH5-217ENST00000494458 SMPXQ9UHP9 88 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 ZFP30Q9Y2G7 519 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 V9GYV3 84 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 SONP18583 2426 aaKnown RBP5.17□□□□□ -1.58
MSH5-217ENST00000494458 NOTCH2Q04721 2471 aa5.17□□□□□ -1.58
MSH5-217ENST00000494458 TRAV9-1A0A075B6T8 112 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 IGHV3-35A0A0C4DH35 117 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 A0A1W2PS18 150 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 C19orf71A6NCJ1 209 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 PGPEP1LA6NFU8 196 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 NPIPB6E9PJ23 425 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 CHEK1O14757 476 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 IGHV3-11P01762 117 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 SLC25A5P05141 298 aaKnown RBP5.16□□□□□ -1.58
MSH5-217ENST00000494458 SRD5A1P18405 259 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 GALR1P47211 349 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 GNG5P63218 68 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 PSG3Q16557 428 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 FAM106AQ4KMX7 169 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 BAGE2Q86Y30 109 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 TMEM183AQ8IXX5 376 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 FAM24BQ8N5W8 94 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 LINC01006Q8NI28 216 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms