RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 C10orf142B7Z368 130 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 J3QKU1 62 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 RELAQ04206 551 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 LIN52Q52LA3 116 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 OOSP2Q86WS3 158 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 LRRC28Q86X40 367 aaPredicted RBP2.68□□□□□ -1.98
SMC2-205ENST00000493955 C12orf29Q8N999 325 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 GDPD1Q8N9F7 314 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 TIMM21Q9BVV7 248 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 UQCC1Q9NVA1 299 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 TP73-AS1Q9UF72 201 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 DOPEY2Q9Y3R5 2298 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 MYO18BQ8IUG5 2567 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 ATMQ13315 3056 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 S1PR2O95136 353 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 CST2P09228 141 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 RBP1P09455 135 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 NFYAP23511 347 aaPredicted RBP2.67□□□□□ -1.98
SMC2-205ENST00000493955 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 OR52L1Q8NGH7 329 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 DCANP1Q8TF63 244 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 CCDC90BQ9GZT6 254 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 U3KQA8 63 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 MGAQ8IWI9 3026 aa2.67□□□□□ -1.98
SMC2-205ENST00000493955 CPAMD8Q8IZJ3 1885 aa2.66□□□□□ -1.98
SMC2-205ENST00000493955 DOCK4Q8N1I0 1966 aa2.66□□□□□ -1.98
SMC2-205ENST00000493955 HELZ2Q9BYK8 2649 aaKnown RBP2.66□□□□□ -1.98
SMC2-205ENST00000493955 A0A1B0GVG6 124 aa2.66□□□□□ -1.98
SMC2-205ENST00000493955 ZNF705FA8MVS1 300 aaPredicted RBP2.66□□□□□ -1.98
SMC2-205ENST00000493955 IFNA10P01566 189 aa2.66□□□□□ -1.98
SMC2-205ENST00000493955 SERPINE1P05121 402 aa2.66□□□□□ -1.98
SMC2-205ENST00000493955 RPS4Y1P22090 263 aaKnown RBP2.66□□□□□ -1.98
SMC2-205ENST00000493955 C12orf74Q32Q52 190 aa2.66□□□□□ -1.98
SMC2-205ENST00000493955 S100A7AQ86SG5 101 aa2.66□□□□□ -1.98
SMC2-205ENST00000493955 RNASE11Q8TAA1 199 aaKnown RBP2.66□□□□□ -1.98
SMC2-205ENST00000493955 H1FXQ92522 213 aaKnown RBP2.66□□□□□ -1.98
SMC2-205ENST00000493955 TNRC6AQ8NDV7 1962 aaKnown RBP2.66□□□□□ -1.98
SMC2-205ENST00000493955 ZNF462Q96JM2 2506 aa2.65□□□□□ -1.98
SMC2-205ENST00000493955 KNTC1P50748 2209 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 A0A0D9SEW6 157 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 PSMD8P48556 350 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 SLC38A11Q08AI6 406 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 SPANXN3Q5MJ09 141 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 KRT222Q8N1A0 295 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 RASSF5Q8WWW0 418 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 ARL5AQ9Y689 179 aa2.65□□□□□ -1.99
SMC2-205ENST00000493955 BSNQ9UPA5 3926 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 TRBV10-2A0A0K0K1G8 114 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 HMSDA8MTL9 139 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 H3BQV1 296 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 PGLYRP1O75594 196 aaPredicted RBP2.64□□□□□ -1.99
SMC2-205ENST00000493955 ZNF682O95780 498 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 KISS1Q15726 138 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 FAM27BQ5VT28 67 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 TEX36Q5VZQ5 186 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 C12orf45Q8N5I9 185 aaPredicted RBP2.64□□□□□ -1.99
SMC2-205ENST00000493955 OR10X1Q8NGY0 326 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 PHB2Q99623 299 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 IL20Q9NYY1 176 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 FAM32AQ9Y421 112 aaKnown RBP2.64□□□□□ -1.99
SMC2-205ENST00000493955 KALRNO60229 2985 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 CFAP46Q8IYW2 2715 aa2.64□□□□□ -1.99
SMC2-205ENST00000493955 hCG_1818297A0A087WSY0 165 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 A8MT66 165 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 OR2B3O76000 313 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 EIF2B2P49770 351 aaKnown RBP2.63□□□□□ -1.99
SMC2-205ENST00000493955 FXYD2P54710 66 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 SUPT4H1P63272 117 aaKnown RBP2.63□□□□□ -1.99
SMC2-205ENST00000493955 TAF1AQ15573 450 aaPredicted RBP2.63□□□□□ -1.99
SMC2-205ENST00000493955 MOGQ16653 247 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 TMEM42Q69YG0 159 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 CEP19Q96LK0 163 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 TCEAL2Q9H3H9 227 aaPredicted RBP2.63□□□□□ -1.99
SMC2-205ENST00000493955 RTTNQ86VV8 2226 aa2.63□□□□□ -1.99
SMC2-205ENST00000493955 FLNBO75369 2602 aaKnown RBP2.63□□□□□ -1.99
SMC2-205ENST00000493955 FN1P02751 2386 aaKnown RBP2.63□□□□□ -1.99
SMC2-205ENST00000493955 HECTD1Q9ULT8 2610 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 PTPN13Q12923 2485 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 NAV2Q8IVL1 2488 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 OR51F1A6NGY5 319 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 FAM159BA6NKW6 160 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 TRAPPC2LH3BP13 241 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 C8GP07360 202 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 ZNF80P51504 273 aaPredicted RBP2.62□□□□□ -1.99
SMC2-205ENST00000493955 DEFB133Q30KQ1 61 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 TAC4Q86UU9 113 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 LINC00301Q8NCQ3 95 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 OR4C6Q8NH72 309 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 C9orf16Q9BUW7 83 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 STOML2Q9UJZ1 356 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 UNC13CQ8NB66 2214 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 DOCK10Q96BY6 2186 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 MAST4O15021 2626 aa2.62□□□□□ -1.99
SMC2-205ENST00000493955 SPENQ96T58 3664 aaKnown RBP2.61□□□□□ -1.99
SMC2-205ENST00000493955 NAPSAO96009 420 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 PPIBP23284 216 aaKnown RBP2.61□□□□□ -1.99
SMC2-205ENST00000493955 MAGEA12P43365 314 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 AQP4P55087 323 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 HACD4Q5VWC8 232 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 SLC36A1Q7Z2H8 476 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms