RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CIARTQ8N365 385 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-222ENST00000493919 ZNF114Q8NC26 417 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 SMIM7Q9BQ49 75 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 LOC107986453A0A1B0GWG9 222 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 TEX22C9J3V5 150 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 SDCBPO00560 298 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-222ENST00000493919 MT-ND6P03923 174 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 NANOS3P60323 173 aaKnown RBP9.31□□□□□ -0.92
BRCA1-222ENST00000493919 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 OR11H6Q8NGC7 330 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 TANC2Q9HCD6 1990 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 SLC25A16P16260 332 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 CFPP27918 469 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 DMRTC1Q5HYR2 192 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 ARPC1AQ92747 370 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 KIR2DL4Q99706 377 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 NAA60Q9H7X0 242 aa9.31□□□□□ -0.92
BRCA1-222ENST00000493919 TRBV20-1A0A075B6N2 111 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 CRXO43186 299 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-222ENST00000493919 IGLV3-1P01715 115 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 GRPP07492 148 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 SMIM13P0DJ93 91 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 ID3Q02535 119 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 IBA57Q5T440 356 aaKnown RBP9.3□□□□□ -0.92
BRCA1-222ENST00000493919 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 OR4X2Q8NGF9 303 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 OR51H1Q8NH63 302 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 PPDPFLQ8WWR9 84 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-222ENST00000493919 SCGB3A2Q96PL1 93 aa9.3□□□□□ -0.92
BRCA1-222ENST00000493919 TEP1Q99973 2627 aaKnown RBP9.3□□□□□ -0.92
BRCA1-222ENST00000493919 IGHV3-7P01780 117 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 COX8AP10176 69 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 HERVK_113P63121 156 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 CT83Q5H943 113 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 SH2D6Q7Z4S9 175 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 TIMD4Q96H15 378 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 C18orf12Q96KH6 178 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 RNASE7Q9H1E1 156 aaKnown RBP9.29□□□□□ -0.92
BRCA1-222ENST00000493919 MPC1Q9Y5U8 109 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 DYSFO75923 2080 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 A0A087X0K7 114 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 IGHV4-61A0A0C4DH41 118 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 LMX1BO60663 402 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 NAPSAO96009 420 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 PSMB3P49720 205 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 OR10AC1Q8NH08 325 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 PDCD1LG2Q9BQ51 273 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 RTL8AQ9BWD3 113 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 MRPL18Q9H0U6 180 aaKnown RBP9.29□□□□□ -0.92
BRCA1-222ENST00000493919 SVEP1Q4LDE5 3571 aa9.29□□□□□ -0.92
BRCA1-222ENST00000493919 CR1P17927 2039 aa9.28□□□□□ -0.92
BRCA1-222ENST00000493919 ZNF732B4DXR9 585 aa9.28□□□□□ -0.92
BRCA1-222ENST00000493919 CCL1P22362 96 aa9.28□□□□□ -0.92
BRCA1-222ENST00000493919 NMUP48645 174 aa9.28□□□□□ -0.92
BRCA1-222ENST00000493919 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
BRCA1-222ENST00000493919 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
BRCA1-222ENST00000493919 PRO0461Q9UI25 63 aa9.28□□□□□ -0.92
BRCA1-222ENST00000493919 TLN2Q9Y4G6 2542 aa9.27□□□□□ -0.92
BRCA1-222ENST00000493919 A0A1B0GV50 99 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 ZNF20P17024 532 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 HOXA4Q00056 320 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-222ENST00000493919 SLC38A11Q08AI6 406 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 CDK5R1Q15078 307 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 LINC01620Q4KN68 170 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 Q5XG85 94 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 SLC35E4Q6ICL7 350 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 ZNF841Q6ZN19 808 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 ZNF826PQ6ZT77 177 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 WDR86Q86TI4 376 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 TRPT1Q86TN4 253 aaKnown RBP9.27□□□□□ -0.93
BRCA1-222ENST00000493919 ABHD12Q8N2K0 398 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 SMR3AQ99954 134 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 JPT2Q9H910 190 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 C21orf62Q9NYP8 219 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 MED13LQ71F56 2210 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 A0A096LNT2 108 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 WNT9BO14905 357 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 ANGPTL7O43827 346 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
BRCA1-222ENST00000493919 OPRK1P41145 380 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 NMSQ5H8A3 153 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 FAM201AQ5SY85 155 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 GATAD1Q8WUU5 269 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 PLEKHB2Q96CS7 222 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 TMEM70Q9BUB7 260 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 FGF23Q9GZV9 251 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-222ENST00000493919 C5orf66Q9H5L9 145 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 GNB4Q9HAV0 340 aa9.27□□□□□ -0.93
BRCA1-222ENST00000493919 A0A1B0GWB2 263 aa9.26□□□□□ -0.93
BRCA1-222ENST00000493919 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
BRCA1-222ENST00000493919 CEACAM18A8MTB9 384 aa9.26□□□□□ -0.93
BRCA1-222ENST00000493919 TMEM178BH3BS89 294 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms