RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 NRN1Q9NPD7 142 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 OSTCQ9NRP0 149 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 WNK2Q9Y3S1 2297 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 ISLRO14498 428 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 GPX1P07203 203 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 HNRNPA3P51991 378 aaKnown RBP10.9□□□□□ -0.66
VCP-207ENST00000493886 CCDC144NLQ6NUI1 221 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 DYNAPQ8N1N2 210 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 SIRPDQ9H106 197 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 ZNF586Q9NXT0 402 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 I3L2K1 104 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 K7EQM0 130 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 CAMPP49913 170 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 PERPQ96FX8 193 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 YAE1D1Q9NRH1 226 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 THYN1Q9P016 225 aa10.9□□□□□ -0.66
VCP-207ENST00000493886 A0A1W2PS18 150 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 AMY1AP04745 511 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 Q0VG73 95 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 MINOS1Q5TGZ0 78 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 BPESC1Q9GZL8 116 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 GEMIN7Q9H840 131 aaKnown RBP10.89□□□□□ -0.67
VCP-207ENST00000493886 MINOS1-NBL1R4GNA1 71 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 OOSP1A8MZH6 123 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 TOX4O94842 621 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 AMMECR1LQ6DCA0 310 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 FXYD5Q96DB9 178 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 KCNS1Q96KK3 526 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 AKAP6Q13023 2319 aa10.89□□□□□ -0.67
VCP-207ENST00000493886 HYPMO75409 117 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 ESDP10768 282 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 RHOGP84095 191 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 ZNF331Q9NQX6 463 aaPredicted RBP10.88□□□□□ -0.67
VCP-207ENST00000493886 APCSP02743 223 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 IGLC1P0CG04 106 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 TRBV9A0A0B4J1U6 114 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 OVOL3O00110 214 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 PEX7O00628 323 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 MT-ND6P03923 174 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 PLP1P60201 277 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 LMO4P61968 165 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 LCN12Q6JVE5 192 aa10.88□□□□□ -0.67
VCP-207ENST00000493886 SMIM27A0A1W2PRY6 76 aa10.87□□□□□ -0.67
VCP-207ENST00000493886 ZNF329Q86UD4 541 aa10.87□□□□□ -0.67
VCP-207ENST00000493886 K7EIM0 57 aa10.87□□□□□ -0.67
VCP-207ENST00000493886 SCGB1A1P11684 91 aa10.87□□□□□ -0.67
VCP-207ENST00000493886 GDF5OSQ5U4N7 250 aa10.87□□□□□ -0.67
VCP-207ENST00000493886 Q8N976 141 aa10.87□□□□□ -0.67
VCP-207ENST00000493886 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
VCP-207ENST00000493886 NCBP2LA6PVI3 153 aaKnown RBP10.86□□□□□ -0.67
VCP-207ENST00000493886 SNAI2O43623 268 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 ZNF324O75467 553 aaPredicted RBP10.86□□□□□ -0.67
VCP-207ENST00000493886 HLA-DQA1P01909 254 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 C3orf79P0CE67 100 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 SPATA45Q537H7 98 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 Q8N6K4 173 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 NUP35Q8NFH5 326 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 OR2T8A6NH00 312 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 M0QXV9 152 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 SLC25A5P05141 298 aaKnown RBP10.86□□□□□ -0.67
VCP-207ENST00000493886 EBI3Q14213 229 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 PSG3Q16557 428 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 SIGMAR1Q99720 223 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 RASL11BQ9BPW5 248 aa10.86□□□□□ -0.67
VCP-207ENST00000493886 H0Y8G0 127 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 RPS20P60866 119 aaKnown RBP10.85□□□□□ -0.67
VCP-207ENST00000493886 LYZP61626 148 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 UBE2G1P62253 170 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 ZNF562Q6V9R5 426 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 C5orf17Q8NAS9 161 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 C18orf32Q8TCD1 76 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 HIGD1CA8MV81 97 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 IGHV4-39P01824 125 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 UBE2E1P51965 193 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 TCF24Q7RTU0 167 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 ARPC1AQ92747 370 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 HIGD1AQ9Y241 93 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 IGKV1-17P01599 117 aa10.85□□□□□ -0.67
VCP-207ENST00000493886 KLF17Q5JT82 389 aaPredicted RBP10.85□□□□□ -0.67
VCP-207ENST00000493886 RNASEKQ6P5S7 137 aaKnown RBP10.85□□□□□ -0.67
VCP-207ENST00000493886 PGPA6NDG6 321 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 MYCNOSP40205 109 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 NDPQ00604 133 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 Q71RC1 249 aaPredicted RBP10.84□□□□□ -0.67
VCP-207ENST00000493886 ASCL2Q99929 193 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 VWC2LB2RUY7 222 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 GP9P14770 177 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 FOXA3P55318 350 aaPredicted RBP10.84□□□□□ -0.67
VCP-207ENST00000493886 PMCHL1Q16048 86 aa10.84□□□□□ -0.67
VCP-207ENST00000493886 SH2D7A6NKC9 451 aaPredicted RBP10.83□□□□□ -0.68
VCP-207ENST00000493886 NPIPB5A8MRT5 1133 aa10.83□□□□□ -0.68
VCP-207ENST00000493886 SPTAN1Q13813 2472 aaKnown RBP10.83□□□□□ -0.68
VCP-207ENST00000493886 HSBP1O75506 76 aa10.83□□□□□ -0.68
VCP-207ENST00000493886 LINC00322Q6ZN03 302 aaPredicted RBP10.83□□□□□ -0.68
VCP-207ENST00000493886 BORCS7Q96B45 105 aa10.83□□□□□ -0.68
VCP-207ENST00000493886 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
VCP-207ENST00000493886 VCX2Q9H322 139 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms