RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SLC25A22Q9H936 323 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 RNF24Q9Y225 148 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 IGHV3-66A0A0C4DH42 116 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 A0A1W2PS18 150 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 A8MWP6 167 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 H3BRN7 92 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 K7EMT4 169 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 RAB5CP51148 216 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 ICAM4Q14773 271 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 TEX261Q6UWH6 196 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 PATE2Q6UY27 113 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 DYNLRB2Q8TF09 96 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 TMEM37Q8WXS4 190 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 GRAMD2BQ96HH9 432 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 ASCL2Q99929 193 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 SCRT1Q9BWW7 348 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 SLC25A39Q9BZJ4 359 aaPredicted RBP9.16□□□□□ -0.94
UPF3A-210ENST00000493727 RPRMQ9NS64 109 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 MRPL27Q9P0M9 148 aaKnown RBP9.16□□□□□ -0.94
UPF3A-210ENST00000493727 UBQLN2Q9UHD9 624 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 FUT9Q9Y231 359 aa9.16□□□□□ -0.94
UPF3A-210ENST00000493727 IGHV7-4-1A0A0J9YVY3 117 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 C2orf70A6NJV1 201 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 ZNF705EA8MWA4 302 aaPredicted RBP9.15□□□□□ -0.94
UPF3A-210ENST00000493727 CRYBB3P26998 211 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 SULT1A2P50226 295 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 TAS2R45P59539 299 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 SPATA31B1PQ5VZV4 182 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 DPPA3Q6W0C5 159 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 MIR17HGQ75NE6 70 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 ZNF680Q8NEM1 530 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 MARC2Q969Z3 335 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 SHANK2-AS3Q9BTD1 123 aa9.15□□□□□ -0.94
UPF3A-210ENST00000493727 TECRQ9NZ01 308 aaKnown RBP9.15□□□□□ -0.94
UPF3A-210ENST00000493727 CTXND1A0A1B0GTU2 59 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 ZNF98A6NK75 572 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 HMGB3O15347 200 aaKnown RBP9.14□□□□□ -0.95
UPF3A-210ENST00000493727 OR7C2O60412 319 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 EIF3GO75821 320 aaKnown RBP eCLIP9.14□□□□□ -0.95
UPF3A-210ENST00000493727 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 GP9P14770 177 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 LEMD1Q68G75 181 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 IQCF2Q8IXL9 164 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 OR8I2Q8N0Y5 310 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 RPP25LQ8N5L8 163 aaKnown RBP9.14□□□□□ -0.95
UPF3A-210ENST00000493727 RHPN1-AS1Q9BWJ2 59 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 SEPSECSQ9HD40 501 aaKnown RBP9.14□□□□□ -0.95
UPF3A-210ENST00000493727 SMPXQ9UHP9 88 aa9.14□□□□□ -0.95
UPF3A-210ENST00000493727 TRAV5A0A0B4J249 113 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 LCE6AA0A183 80 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 MAP1LC3B2A6NCE7 125 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 TEX46H3BTG2 121 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 APOHP02749 345 aaPredicted RBP9.13□□□□□ -0.95
UPF3A-210ENST00000493727 FOLR2P14207 255 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 EDN2P20800 178 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 CBLN1P23435 193 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 FHITP49789 147 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 LCN15Q6UWW0 184 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 ZNF767PQ75MW2 155 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 RAB24Q969Q5 203 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 RCHY1Q96PM5 261 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 MAP1LC3BQ9GZQ8 125 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
UPF3A-210ENST00000493727 A0A1B0GV50 99 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 CHEK1O14757 476 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 BUB3O43684 328 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 CSN3P07498 182 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 RPL7P18124 248 aaKnown RBP9.12□□□□□ -0.95
UPF3A-210ENST00000493727 GALR1P47211 349 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 RAB14P61106 215 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 BLOC1S1P78537 153 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 C1orf194Q5T5A4 169 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 MORN5Q5VZ52 161 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 BPIFA4PQ86YQ2 179 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 SBSPONQ8IVN8 264 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 STXBP6Q8NFX7 210 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 LRRC20Q8TCA0 184 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 SFT2D1Q8WV19 159 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 GPR82Q96P67 336 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 SLC25A2Q9BXI2 301 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 SELENOKQ9Y6D0 94 aa9.12□□□□□ -0.95
UPF3A-210ENST00000493727 HELTA6NFD8 242 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 ZNF785A8K8V0 405 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 CXorf1O96002 111 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 CD5P06127 495 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 FRMD6-AS1P0C7T7 363 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 ARL14EPLP0DKL9 152 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 FGF8P55075 233 aaPredicted RBP9.11□□□□□ -0.95
UPF3A-210ENST00000493727 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
UPF3A-210ENST00000493727 ZNF726P1Q15940 193 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 CT83Q5H943 113 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 SIGLEC15Q6ZMC9 328 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 PQLC2Q6ZP29 291 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 SSX7Q7RTT5 188 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms