RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 OR5V1Q9UGF6 321 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 E7EQL1 145 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 FADS1O60427 444 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 FAM78BQ5VT40 261 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 LCN8Q6JVE9 175 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 LINC00471Q8N535 108 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 C2orf73Q8N5S3 287 aaPredicted RBP1.9□□□□□ -2.11
SNX13-209ENST00000492626 SPANXA2-OT1Q8N9U9 137 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 PRRT1Q99946 306 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 FAM60AQ9NP50 221 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 DOK5Q9P104 306 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 TP73-AS1Q9UF72 201 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 SLC23A2Q9UGH3 650 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 IGLV3-32A0A0A0MS00 114 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 LYRM1O43325 122 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BKO60814 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 ZNF324O75467 553 aaPredicted RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 IFNA10P01566 189 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BJP06899 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 CXCL1P09341 107 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BOP23527 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 SDC4P31431 198 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BBP33778 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 DAPP51397 102 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BDP58876 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BCP62807 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 ZNF616Q08AN1 781 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST2H2BEQ16778 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 RNASE10Q5GAN6 216 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 C1orf195Q5TG92 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 EBLN2Q6P2I7 272 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 TCF24Q7RTU0 167 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 DEFB104AQ8WTQ1 72 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BHQ93079 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BNQ99877 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BMQ99879 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 TLN2Q9Y4G6 2542 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 ZFHX3Q15911 3703 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 ASPMQ8IZT6 3477 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 INTS1Q8N201 2190 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 TRAV14DV4A0A0A6YYC5 116 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 A0A1W2PQL4 384 aaPredicted RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 UBE2L6O14933 153 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 KRTAP1-4P0C5Y4 121 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 RPL22P35268 128 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 SULT1A1P50225 295 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 DYNLT3P51808 116 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 VN1R4Q7Z5H5 301 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 C8orf59Q8N0T1 100 aaPredicted RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 ZNF615Q8N8J6 731 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 OR5B17Q8NGF7 314 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 OR10K1Q8NGX5 313 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 HIST1H2BLQ99880 126 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 VSIRQ9H7M9 311 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 CCDC167Q9P0B6 97 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 COMMD3Q9UBI1 195 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 ZNF230Q9UIE0 474 aaPredicted RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 LSM2Q9Y333 95 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 SMG1Q96Q15 3661 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 A0A087WUJ7 227 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 DPRXA6NFQ7 191 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 INMT-MINDY4F8WBC2 141 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 WISP3O95389 354 aaPredicted RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 OR13C7P0DN81 318 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 MRPS10P82664 201 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 BSPH1Q075Z2 132 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 SPIN3Q5JUX0 258 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 BAP18Q8IXM2 172 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 ZNF567Q8N184 647 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 ST20-AS1Q8NBB2 130 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 PXT1Q8NFP0 134 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 OR2T35Q8NGX2 323 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 RNASE11Q8TAA1 199 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 MED28Q9H204 178 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 RASL12Q9NYN1 266 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 CACFD1Q9UGQ2 172 aa1.89□□□□□ -2.11
SNX13-209ENST00000492626 MCTS1Q9ULC4 181 aaKnown RBP1.89□□□□□ -2.11
SNX13-209ENST00000492626 IGHV3-43A0A0B4J1X8 118 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 DISC1C4P0D8 188 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 C8orf87E5RJ46 101 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 OR1I1O60431 355 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 CD5P06127 495 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 OR1E2P47887 323 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 FOXA1P55317 472 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 DEFA1P59665 94 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 DEFA3P59666 94 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 EIF4EBP1Q13541 118 aaPredicted RBP1.88□□□□□ -2.11
SNX13-209ENST00000492626 SPATA31B1PQ5VZV4 182 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 FAM24BQ8N5W8 94 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 OR13C8Q8NGS7 320 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 OR4K15Q8NH41 348 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 OR4A5Q8NH83 315 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 PDCD10Q9BUL8 212 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 CACYBPQ9HB71 228 aaKnown RBP1.88□□□□□ -2.11
SNX13-209ENST00000492626 TNFSF18Q9UNG2 199 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 S4R3C0 116 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 SH2D1AO60880 128 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 PDYNP01213 254 aa1.88□□□□□ -2.11
SNX13-209ENST00000492626 C8GP07360 202 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms