RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 HPGDSO60760 199 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 CDKN1BP46527 198 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 SMCO1Q147U7 214 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 STEAP1BQ6NZ63 245 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 TMEM229BQ8NBD8 167 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR52I2Q8NH67 350 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR1S1Q8NH92 325 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 LHFPL5Q8TAF8 219 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 AP3S1Q92572 193 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 RBKSQ9H477 322 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 HSPB7Q9UBY9 170 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 RNF24Q9Y225 148 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 TMEM56-RWDD3S4R434 201 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 IGKV1D-37A0A075B6S9 117 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 A0A087WXM4 84 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 GAGE12BA1L429 117 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 GAGE7O76087 117 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 GAGE12FP0CL80 117 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 GAGE12GP0CL81 117 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 GAGE12IP0CL82 117 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 ANXA3P12429 323 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 RPL7P18124 248 aaKnown RBP6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 XGP55808 180 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 RAP2BP61225 183 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 ICAM4Q14773 271 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 RNF182Q8N6D2 247 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR8A1Q8NGG7 326 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 YIPF6Q96EC8 236 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 C17orf77Q96MU5 243 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 SCGB3A2Q96PL1 93 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 C20orf144Q9BQM9 153 aa6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 RTBDNQ9BSG5 229 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 SRRM2Q9UQ35 2752 aaKnown RBP6.72□□□□□ -1.33
TNFRSF9-203ENST00000492571 A0A0B4J2A0 478 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 CRYM-AS1A6NIL9 109 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 SRPXP78539 464 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 IGFL4Q6B9Z1 124 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 Q6ZSN1 163 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 OR4D10Q8NGI6 311 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 RNASE8Q8TDE3 154 aaKnown RBP6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 PRRT1Q99946 306 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 TMPRSS5Q9H3S3 457 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 EXTL2Q9UBQ6 330 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 SHPKQ9UHJ6 478 aa6.71□□□□□ -1.34
TNFRSF9-203ENST00000492571 TRGV2A0A075B6R0 118 aa6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 MED6O75586 246 aa6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 GCSHP23434 173 aa6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 AKR1C1Q04828 323 aa6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 SSBP1Q04837 148 aaKnown RBP6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 PSG3Q16557 428 aa6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 THAP8Q8NA92 274 aa6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 CIB3Q96Q77 187 aaPredicted RBP6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 GPR132Q9UNW8 380 aa6.7□□□□□ -1.34
TNFRSF9-203ENST00000492571 FAT1Q14517 4588 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 IL5P05113 134 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 ANXA7P20073 488 aaKnown RBP6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 MRPS10P82664 201 aaKnown RBP6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 LYZL2Q7Z4W2 148 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 CCDC190Q86UF4 302 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 RPUSD4Q96CM3 377 aaKnown RBP6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 MDFICQ9P1T7 246 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 SCP2D1Q9UJQ7 156 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 HIGD1AQ9Y241 93 aa6.69□□□□□ -1.34
TNFRSF9-203ENST00000492571 IGKV1OR2-108A0A075B7D4 117 aa6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 HYPMO75409 117 aa6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 OR5G3P0C626 314 aa6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 AKAIN1P0CW23 69 aa6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 IAPPP10997 89 aa6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 CXCL3P19876 107 aa6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 FUSP35637 526 aaKnown RBP eCLIP6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
TNFRSF9-203ENST00000492571 A0A087WTM6 91 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 A0A096LPF7 62 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 SMCO3A2RU48 225 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 K7EP13 123 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 NXPH4O95158 308 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 GATA2P23769 480 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 VBP1P61758 197 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 NCS1P62166 190 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 FAAP20Q6NZ36 180 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 TMED4Q7Z7H5 227 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 CLVS1Q8IUQ0 354 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 LINC00612Q8N6U2 182 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 SHANK2-AS3Q9BTD1 123 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 FUNDC2Q9BWH2 189 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 ICOSQ9Y6W8 199 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 LY96Q9Y6Y9 160 aa6.67□□□□□ -1.34
TNFRSF9-203ENST00000492571 DUXBA0A1W2PPF3 345 aa6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 H3BRN7 92 aa6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 RGS5O15539 181 aa6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 CXCL2P19875 107 aa6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 EVI2AP22794 236 aa6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 SELENOTP62341 195 aa6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 DAZ2Q13117 558 aaKnown RBP6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 SLAQ13239 276 aa6.66□□□□□ -1.34
TNFRSF9-203ENST00000492571 SPANXN5Q5MJ07 72 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms