RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 WDR83OSQ9Y284 106 aa8.45□□□□□ -1.06
MDC1-207ENST00000492462 TRAV5A0A0B4J249 113 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 UBE2L5PA0A1B0GUS4 154 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 M0R2Z0 102 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 COX7A2P2O60397 106 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 PVALBP20472 110 aaPredicted RBP8.44□□□□□ -1.06
MDC1-207ENST00000492462 SULT1A1P50225 295 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 PRR20EP86478 221 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 PRR20CP86479 221 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 PRR20DP86480 221 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 PRR20BP86481 221 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 PRR20AP86496 221 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 OPCMLQ14982 345 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 SPINK13Q1W4C9 94 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 VWC2Q2TAL6 325 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 LGALS9CQ6DKI2 356 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 ZNF738Q8NE65 137 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 NEU1Q99519 415 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 UQCC1Q9NVA1 299 aa8.44□□□□□ -1.06
MDC1-207ENST00000492462 TRAV10A0A0B4J240 114 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 C11orf94C9JXX5 98 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 H0YIZ8 118 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 SLC17A3O00476 420 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 CRXO43186 299 aaPredicted RBP8.43□□□□□ -1.06
MDC1-207ENST00000492462 HIST1H1AQ02539 215 aaPredicted RBP8.43□□□□□ -1.06
MDC1-207ENST00000492462 PSG3Q16557 428 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 PXDC1Q5TGL8 231 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 GPN1Q9HCN4 374 aaPredicted RBP8.43□□□□□ -1.06
MDC1-207ENST00000492462 OR5AC2Q9NZP5 309 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 RFNGQ9Y644 331 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 HECTD4Q9Y4D8 3996 aa8.43□□□□□ -1.06
MDC1-207ENST00000492462 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 PRAC2D3DTV9 90 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 H3BQ15 152 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 DUSP14O95147 198 aaKnown RBP8.42□□□□□ -1.06
MDC1-207ENST00000492462 S100A11P31949 105 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 NHLH2Q02577 135 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 BAXQ07812 192 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 LRRC37A5PQ49AS3 106 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 C10orf113Q5VZT2 155 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 STX12Q86Y82 276 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 BAP18Q8IXM2 172 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 OR8A1Q8NGG7 326 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 LRRC20Q8TCA0 184 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 RPUSD4Q96CM3 377 aaKnown RBP8.42□□□□□ -1.06
MDC1-207ENST00000492462 IGF2BP2-AS1Q96M15 143 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 DNAJC4Q9NNZ3 241 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 ZNF331Q9NQX6 463 aaPredicted RBP8.42□□□□□ -1.06
MDC1-207ENST00000492462 SLC39A9Q9NUM3 307 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 GOLT1BQ9Y3E0 138 aa8.42□□□□□ -1.06
MDC1-207ENST00000492462 UBR4Q5T4S7 5183 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 DEFB131BA0A096LNP1 70 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 LOC102723971A0A1B0GUV8 181 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 HBE1P02100 147 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 IGLC2P0DOY2 106 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 FGF7P21781 194 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 RPL29P47914 159 aaKnown RBP8.41□□□□□ -1.06
MDC1-207ENST00000492462 H2BFSP57053 126 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 RAB31Q13636 194 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 GCSAMLQ5JQS6 135 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 FAM222AQ5U5X8 452 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 BPIFA4PQ86YQ2 179 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 MARVELD1Q9BSK0 173 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 DKK2Q9UBU2 259 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 PXMP4Q9Y6I8 212 aa8.41□□□□□ -1.06
MDC1-207ENST00000492462 ZNF705GA8MUZ8 300 aaPredicted RBP8.4□□□□□ -1.06
MDC1-207ENST00000492462 BOLA2-SMG1P6H3BVE0 249 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 PRAF2O60831 178 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 SPART-AS1P0CW21 52 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 B2MP61769 119 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 RHOBP62745 196 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 HBG1P69891 147 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 HBG2P69892 147 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 LCN15Q6UWW0 184 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 Q6ZRG5 221 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 S100A7AQ86SG5 101 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 OR5C1Q8NGR4 320 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 THAP6Q8TBB0 222 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 SAT2Q96F10 170 aaPredicted RBP8.4□□□□□ -1.06
MDC1-207ENST00000492462 TMEM208Q9BTX3 173 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 PARD6GQ9BYG4 376 aaPredicted RBP8.4□□□□□ -1.06
MDC1-207ENST00000492462 NMES1Q9C002 83 aa8.4□□□□□ -1.06
MDC1-207ENST00000492462 YTHDF2Q9Y5A9 579 aaKnown RBP8.4□□□□□ -1.06
MDC1-207ENST00000492462 TMEM189A5PLL7 270 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 INSP01308 110 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 CXCL2P19875 107 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 AZU1P20160 251 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 TCTAP57738 103 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 CLINT1Q14677 625 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 ATP6V1FQ16864 119 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 OR1L4Q8NGR5 311 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 RNF126Q9BV68 326 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 NPCDR1Q9BY65 106 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 ZNF586Q9NXT0 402 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms