RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 OVOL1O14753 267 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 PAGE4O60829 102 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 PYYP10082 97 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 INSL3P51460 131 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 PAFAH1B2P68402 229 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 HAGHQ16775 308 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 KRTAP24-1Q3LI83 254 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 SMIM12Q96EX1 92 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 SEC11CQ9BY50 192 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 TMPRSS5Q9H3S3 457 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 NRN1Q9NPD7 142 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 ZNF586Q9NXT0 402 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 TRBV6-1A0A0K0K1D8 114 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 TMEM218A2RU14 115 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 H3BQ15 152 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 K7EQM0 130 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 SLC25A5P05141 298 aaKnown RBP7.33□□□□□ -1.24
USP54-214ENST00000492357 SRP19P09132 144 aaKnown RBP7.33□□□□□ -1.24
USP54-214ENST00000492357 OR10J4P0C629 311 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 FOLR2P14207 255 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 CMC4P56277 68 aaPredicted RBP7.33□□□□□ -1.24
USP54-214ENST00000492357 CD81P60033 236 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 TM4SF20Q53R12 229 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 C10orf91Q5T1B1 145 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 CST9LP1Q5W188 147 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 FAM90A2PQ658T7 463 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 LEMD1Q68G75 181 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 DLX4Q92988 240 aaPredicted RBP7.33□□□□□ -1.24
USP54-214ENST00000492357 MCRIP2Q9BUT9 160 aaKnown RBP7.33□□□□□ -1.24
USP54-214ENST00000492357 TREM1Q9NP99 234 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 ZNF331Q9NQX6 463 aaPredicted RBP7.33□□□□□ -1.24
USP54-214ENST00000492357 LY96Q9Y6Y9 160 aa7.33□□□□□ -1.24
USP54-214ENST00000492357 NIPBLQ6KC79 2804 aaeCLIP7.32□□□□□ -1.24
USP54-214ENST00000492357 A0A1B0GV50 99 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 RBAKDNA6NC62 111 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 ZNF785A8K8V0 405 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 GGTLC3B5MD39 225 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 TSPAN4O14817 238 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 NDUFB4O95168 129 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 ID1P41134 155 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 CSN1S1P47710 185 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 SLURP1P55000 103 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 TAS2R60P59551 318 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
USP54-214ENST00000492357 PNRC1Q12796 327 aaPredicted RBP7.32□□□□□ -1.24
USP54-214ENST00000492357 DEFB136Q30KP8 78 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 SOHLH1Q5JUK2 328 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 CMTM2Q8TAZ6 248 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 ATG101Q9BSB4 218 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 GPR61Q9BZJ8 451 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 Q9H3A6 140 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 CARHSP1Q9Y2V2 147 aaKnown RBP7.32□□□□□ -1.24
USP54-214ENST00000492357 KLF12Q9Y4X4 402 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 YTHDF2Q9Y5A9 579 aaKnown RBP7.32□□□□□ -1.24
USP54-214ENST00000492357 SMAD5-AS1Q9Y6J3 95 aa7.32□□□□□ -1.24
USP54-214ENST00000492357 TRBV7-9A0A0J9YWB2 115 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 C9JCJ5 164 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 APOHP02749 345 aaPredicted RBP7.31□□□□□ -1.24
USP54-214ENST00000492357 PF4P02776 101 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 CSN3P07498 182 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 SFTA3P0C7M3 94 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 KRTAP10-3P60369 221 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 RANP62826 216 aaKnown RBP7.31□□□□□ -1.24
USP54-214ENST00000492357 C18orf65Q6ZTR6 163 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 TCF24Q7RTU0 167 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 PRIMA1Q86XR5 153 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 CYB561D1Q8N8Q1 229 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 CITED4Q96RK1 184 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 SPAG8Q99932 426 aaPredicted RBP7.31□□□□□ -1.24
USP54-214ENST00000492357 RARRES2Q99969 163 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 FAM110AQ9BQ89 295 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 PPP1R14DQ9NXH3 145 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 EPDR1Q9UM22 224 aa7.31□□□□□ -1.24
USP54-214ENST00000492357 JMJD1CQ15652 2540 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 IGHV3OR16-8A0A075B7F1 116 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 PGPA6NDG6 321 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 OR4C46A6NHA9 309 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 SOCS3O14543 225 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 ZNF207O43670 478 aaKnown RBP7.3□□□□□ -1.24
USP54-214ENST00000492357 TCRAP04437 139 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 ATP5G3P48201 142 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 CNN1P51911 297 aaKnown RBP7.3□□□□□ -1.24
USP54-214ENST00000492357 UBE2G2P60604 165 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 SNRPD3P62318 126 aaKnown RBP7.3□□□□□ -1.24
USP54-214ENST00000492357 C12orf54Q6X4T0 127 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 C11orf44Q8N8P7 122 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 TMEM75Q8N9X5 138 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 WFDC9Q8NEX5 89 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 DYNLRB2Q8TF09 96 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 C2CD4CQ8TF44 421 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 BLNKQ8WV28 456 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 FMC1Q96HJ9 113 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 NIPSNAP3BQ9BS92 247 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 BIN3Q9NQY0 253 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 LENEPQ9Y5L5 61 aa7.3□□□□□ -1.24
USP54-214ENST00000492357 ZFHX3Q15911 3703 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 A0A1W2PRX2 142 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms