RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FMC1Q96HJ9 113 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 TMUB1Q9BVT8 246 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 CLEC5AQ9NY25 188 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 TP73-AS1Q9UF72 201 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 IGLV11-55A0A075B6I3 123 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 C19orf71A6NCJ1 209 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 DIRC3C9JPN6 131 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 G3V318 75 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 IGLC2P0DOY2 106 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 ESDP10768 282 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 PAFAH1B2P68402 229 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 DTX2Q86UW9 622 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 NPBQ8NG41 125 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 OR4F17Q8NGA8 305 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 Q8TAT8 98 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 SNHG12Q9BXW3 62 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 IGKV2-40A0A087WW87 121 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-220ENST00000492280 IGHV7-81A0A0B4J1V7 117 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 IGKV2D-40P01614 121 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-220ENST00000492280 C3orf79P0CE67 100 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 SAA4P35542 130 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 C1orf194Q5T5A4 169 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 LINC00469Q8N7U9 141 aa9.75□□□□□ -0.85
HMGN1-220ENST00000492280 SOX21Q9Y651 276 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-220ENST00000492280 USP24Q9UPU5 2620 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 EPG5Q9HCE0 2579 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 KIR2DL5BA0A0G2JN68 375 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 KIR2DL5BA0A0G2JPC4 375 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 EGR2P11161 476 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-220ENST00000492280 GPR183P32249 361 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 KIR2DL5AQ8N109 375 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 C21orf62Q9NYP8 219 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 CSN3P07498 182 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 BATFQ16520 125 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 OR10J3Q5JRS4 329 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 ITLN2Q8WWU7 325 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-220ENST00000492280 URB1-AS1Q96HZ7 61 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 ALKBH7Q9BT30 221 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-220ENST00000492280 SIRPDQ9H106 197 aa9.74□□□□□ -0.85
HMGN1-220ENST00000492280 FBN2P35556 2912 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 A0A1B0GXF2 115 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
HMGN1-220ENST00000492280 ZNF207O43670 478 aaKnown RBP9.73□□□□□ -0.85
HMGN1-220ENST00000492280 ARMS2P0C7Q2 107 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 HBBP68871 147 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 ZNF562Q6V9R5 426 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 BRD3OSQ6XYD6 125 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 LINC00173Q6ZV60 143 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 PIP4P2Q8N4L2 257 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 ZNF414Q96IQ9 312 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 RNF5Q99942 180 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 MCRIP2Q9BUT9 160 aaKnown RBP9.73□□□□□ -0.85
HMGN1-220ENST00000492280 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 PRSS22Q9GZN4 317 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 SELENOKQ9Y6D0 94 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 ATP6V0E1O15342 81 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 HSBP1O75506 76 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 CRIP1P50238 77 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 SPATA12Q7Z6I5 190 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 Q8N9W7 124 aa9.73□□□□□ -0.85
HMGN1-220ENST00000492280 PAX2Q02962 417 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 AJUBAQ96IF1 538 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 PRORYQ9H606 182 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 PSG8Q9UQ74 426 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 A8MWL6 223 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 M0R2Z0 102 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 MFAP4P55083 255 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 UNQ5815/PRO19632Q6UWF5 114 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 Q8N6K4 173 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 C1RLQ9NZP8 487 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 TMEM14CQ9P0S9 112 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 CREBBPQ92793 2442 aa9.72□□□□□ -0.85
HMGN1-220ENST00000492280 IGHV2-70DA0A0C4DH43 119 aa9.71□□□□□ -0.85
HMGN1-220ENST00000492280 H0Y8G0 127 aa9.71□□□□□ -0.85
HMGN1-220ENST00000492280 C15orf32Q32M92 178 aa9.71□□□□□ -0.85
HMGN1-220ENST00000492280 EBLN2Q6P2I7 272 aa9.71□□□□□ -0.85
HMGN1-220ENST00000492280 TMEM75Q8N9X5 138 aa9.71□□□□□ -0.85
HMGN1-220ENST00000492280 MXRA5Q9NR99 2828 aa9.71□□□□□ -0.86
HMGN1-220ENST00000492280 WI2-2373I1.2A0A1W2PRP0 233 aa9.71□□□□□ -0.86
HMGN1-220ENST00000492280 CTSGP08311 255 aa9.71□□□□□ -0.86
HMGN1-220ENST00000492280 LURAP1LQ8IV03 231 aa9.71□□□□□ -0.86
HMGN1-220ENST00000492280 WIPF2Q8TF74 440 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-220ENST00000492280 ZMAT5Q9UDW3 170 aaKnown RBP9.71□□□□□ -0.86
HMGN1-220ENST00000492280 LMO4P61968 165 aa9.7□□□□□ -0.86
HMGN1-220ENST00000492280 RNF182Q8N6D2 247 aa9.7□□□□□ -0.86
HMGN1-220ENST00000492280 NPIPB5A8MRT5 1133 aa9.7□□□□□ -0.86
HMGN1-220ENST00000492280 CHEK1O14757 476 aa9.7□□□□□ -0.86
HMGN1-220ENST00000492280 CCDC144NLQ6NUI1 221 aa9.7□□□□□ -0.86
HMGN1-220ENST00000492280 RBPMS2Q6ZRY4 209 aaKnown RBP9.7□□□□□ -0.86
HMGN1-220ENST00000492280 MYO9AB2RTY4 2548 aa9.7□□□□□ -0.86
HMGN1-220ENST00000492280 IGHV4-39P01824 125 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 EFNA4P52798 201 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 PSG3Q16557 428 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 SPATA45Q537H7 98 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 TTC9CQ8N5M4 171 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 VGLL1Q99990 258 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 OVOL3O00110 214 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 RHOGP84095 191 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms