RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 SULT1A1P50225 295 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 VAMP2P63027 116 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 ARL16Q0P5N6 197 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 VWC2Q2TAL6 325 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 C2orf83Q53S99 150 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 FAM222AQ5U5X8 452 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 CEBPZOSA8MTT3 80 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 BCL2L11O43521 198 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 CLN5O75503 358 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 IAPPP10997 89 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 HTR2BP41595 481 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 DAD1P61803 113 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 TMEM88Q6PEY1 159 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 SPATA12Q7Z6I5 190 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 STOML3Q8TAV4 291 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 PARD6GQ9BYG4 376 aaPredicted RBP7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 WFDC1Q9HC57 220 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 STRAPQ9Y3F4 350 aaKnown RBP7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
CLCNKA-206ENST00000491433 IGHV3OR16-12A0A075B7B8 117 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 FNDC10F2Z333 226 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 HBE1P02100 147 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 NUP62P37198 522 aaPredicted RBP7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 CCL18P55774 89 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 RPP30P78346 268 aaKnown RBP7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 ATP6V1FQ16864 119 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 SPINK9Q5DT21 86 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 SPANXN5Q5MJ07 72 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 C16orf54Q6UWD8 224 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 SLC51BQ86UW2 128 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 SLC24A4Q8NFF2 622 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 OR4X1Q8NH49 305 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 ARPC5LQ9BPX5 153 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 GGACTQ9BVM4 153 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 ARL6Q9H0F7 186 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 HEYLQ9NQ87 328 aaPredicted RBP7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 GOLT1BQ9Y3E0 138 aa7.88□□□□□ -1.15
CLCNKA-206ENST00000491433 H3BP45 60 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 RGS13O14921 159 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 METTL15P1P0C7V9 234 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 CAV2P51636 162 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 SPATA31B1PQ5VZV4 182 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 ZNRF2Q8NHG8 242 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 Q8WTZ3 238 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 CLUHP3Q96NS8 147 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 ENY2Q9NPA8 101 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 NRN1Q9NPD7 142 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 U3KQE9 123 aa7.87□□□□□ -1.15
CLCNKA-206ENST00000491433 LOC102723971A0A1B0GUV8 181 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 RPS10-NUDT3A0A1W2PQS6 291 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 CST7O76096 145 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 CFDP00746 253 aaPredicted RBP7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 BTF3P20290 206 aaKnown RBP7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 OPRK1P41145 380 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 DLK1P80370 383 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 RRN3P1Q2M238 152 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 TTC32Q5I0X7 151 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 TEX261Q6UWH6 196 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 OR5C1Q8NGR4 320 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 RNASEH2CQ8TDP1 164 aaKnown RBP7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 GLMPQ8WWB7 406 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 PFDN2Q9UHV9 154 aa7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 YTHDF2Q9Y5A9 579 aaKnown RBP7.86□□□□□ -1.15
CLCNKA-206ENST00000491433 KANTRA0A1W2PQU2 76 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 GPX4P36969 197 aaPredicted RBP7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 ID1P41134 155 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 RAB11AP62491 216 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 HBG1P69891 147 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 HBG2P69892 147 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 Q5VSD8 79 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 RPL7L1Q6DKI1 246 aaKnown RBP7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 SIGLEC15Q6ZMC9 328 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 STX12Q86Y82 276 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 BAP18Q8IXM2 172 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 OR10P1Q8NGE3 313 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 OR1S2Q8NGQ3 325 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 FRZBQ92765 325 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 PHYHIPLQ96FC7 376 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 ATP5SQ99766 215 aa7.85□□□□□ -1.15
CLCNKA-206ENST00000491433 DNAH5Q8TE73 4624 aa7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 LYRM9A8MSI8 78 aa7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 SLC38A11Q08AI6 406 aa7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 FOXI2Q6ZQN5 318 aa7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 ZNF680Q8NEM1 530 aa7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 SAV1Q9H4B6 383 aaPredicted RBP7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 FNDC4Q9H6D8 234 aaPredicted RBP7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 WDR83OSQ9Y284 106 aa7.84□□□□□ -1.15
CLCNKA-206ENST00000491433 NUDT3O95989 172 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 IGKV1-17P01599 117 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 SEC11BP0C7V7 166 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 TPT1P13693 172 aaKnown RBP7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 YPEL3P61236 119 aaPredicted RBP7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 EIF5AP63241 154 aaKnown RBP7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 ZNF266Q14584 549 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 CLINT1Q14677 625 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 MLANAQ16655 118 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 TIGITQ495A1 244 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 OR4B1Q8NGF8 309 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 TMEM147Q9BVK8 224 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms