RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 GGTLC1Q9BX51 225 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 ZNF436Q9C0F3 470 aaPredicted RBP1.87□□□□□ -2.11
PHC3-213ENST00000491258 WFDC10AQ9H1F0 79 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 VCX2Q9H322 139 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 RNF167Q9H6Y7 350 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 AUNIPQ9H7T9 357 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 VCX3AQ9NNX9 186 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 CCL28Q9NRJ3 127 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 NDUFA4L2Q9NRX3 87 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 RHBDL2Q9NX52 303 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 BET1LQ9NYM9 111 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 TAS2R8Q9NYW2 309 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 SSR3Q9UNL2 185 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 UFC1Q9Y3C8 167 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 S4R3C0 116 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 STARD9Q9P2P6 4700 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 SACSQ9NZJ4 4579 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 WNK2Q9Y3S1 2297 aa1.87□□□□□ -2.11
PHC3-213ENST00000491258 DYSFO75923 2080 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 LOC102724200A0A096LPH7 203 aaPredicted RBP1.86□□□□□ -2.11
PHC3-213ENST00000491258 TEX50A0A1B0GTY4 177 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 PCP4L1A6NKN8 68 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 K7EIM0 57 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 K7EMT4 169 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 MED6O75586 246 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 S1PR2O95136 353 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 REG1AP05451 166 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 SERPINE2P07093 398 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 CTSGP08311 255 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 STAG3L2P0CL84 134 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 TRAPPC2P0DI81 140 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 TRAPPC2BP0DI82 140 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 OR13C7P0DN81 318 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 RPA2P15927 270 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 NQO2P16083 231 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 F2RP25116 425 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 CTRLP40313 264 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 LPAR6P43657 344 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 FXYD4P59646 89 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 EWSR1Q01844 656 aaKnown RBP eCLIP1.86□□□□□ -2.11
PHC3-213ENST00000491258 MXD1Q05195 221 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 TNFRSF9Q07011 255 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 SPANXN2Q5MJ10 180 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 IDNKQ5T6J7 187 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 AADACL3Q5VUY0 350 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 CEMP1Q6PRD7 247 aaPredicted RBP1.86□□□□□ -2.11
PHC3-213ENST00000491258 PLET1Q6UQ28 207 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 SLC38A6Q8IZM9 456 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 GDPD1Q8N9F7 314 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 OR10W1Q8NGF6 305 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 OR52B4Q8NGK2 314 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 OR1L6Q8NGR2 347 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 OR1L8Q8NGR8 309 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 OR51H1Q8NH63 302 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 FCGR1BQ92637 280 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 DGCR14Q96DF8 476 aaKnown RBP1.86□□□□□ -2.11
PHC3-213ENST00000491258 ZNF2Q9BSG1 426 aaPredicted RBP1.86□□□□□ -2.11
PHC3-213ENST00000491258 COMMD5Q9GZQ3 224 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 HRASLSQ9HDD0 168 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 DIABLOQ9NR28 239 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 C21orf62Q9NYP8 219 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 COMMD9Q9P000 198 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 MRPL27Q9P0M9 148 aaKnown RBP1.86□□□□□ -2.11
PHC3-213ENST00000491258 SMPXQ9UHP9 88 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 ANAPC10Q9UM13 185 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 TP53TG1Q9Y2A0 90 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 F11RQ9Y624 299 aaKnown RBP1.86□□□□□ -2.11
PHC3-213ENST00000491258 LYSTQ99698 3801 aa1.86□□□□□ -2.11
PHC3-213ENST00000491258 IGHV3OR16-8A0A075B7F1 116 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 IGHV3-21A0A0B4J1V1 117 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 IGHV7-4-1A0A0J9YVY3 117 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 MEIS3P1A6NDR6 274 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 OR2T8A6NH00 312 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 I3L2K1 104 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 ZNF701M0R085 212 aaPredicted RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 GPR31O00270 319 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 NDUFA4O00483 81 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 CYB5BO43169 146 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 TGOLN2O43493 480 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 ZNF207O43670 478 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 SNAPINO95295 136 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 ATP6V1G2O95670 118 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 KRASP01116 189 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 IGKV1-39P01597 117 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 MBP02144 154 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 PMP2P02689 132 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 IGKV1D-39P04432 117 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 CTSDP07339 412 aaPredicted RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 HLA-DMAP28067 261 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 PRSS3P35030 304 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 G6PCP35575 357 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 TGFBR1P36897 503 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 TAGLN2P37802 199 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 CDKN1BP46527 198 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 BCAP31P51572 246 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 HSPE1P61604 102 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 CATR1Q13166 79 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 NEDD8Q15843 81 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 PVRIGQ6DKI7 326 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 LAMTOR1Q6IAA8 161 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms